Medicago truncatula (barrel medic): 25488676
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Entry
25488676 CDS
T01716
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
25488676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25488676
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
25488676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_22
AAA_14
nSTAND3
AAA_33
RNA_helicase
TIP49
AAA_28
NPHP3_N
IstB_IS21
ATPase_2
Viral_helicase1
AAA_18
Mg_chelatase
Vps4_C
Nucleolin_bd
AAA_17
Bac_DnaA
Rad17
AAA_3
NACHT
AAA_19
NB-ARC
ABC_tran
Cytidylate_kin2
TsaE
Parvo_NS1
AAA_11
AAA_7
Motif
Other DBs
NCBI-GeneID:
25488676
NCBI-ProteinID:
XP_013459066
UniProt:
A0A072UTE3
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All DBs
Position
3:complement(7822786..7828999)
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AA seq
826 aa
AA seq
DB search
MVRTSGGGGGRERFLQQTLLRRIDSCKSRFSTADDIVDHLRSTYSSYHRMKFQTLLFSVR
KALLASNNNQASYHSRRRRRNDDSDDDDSEDDDHDHERYSSRKRRRNDESQNDDSENDHE
IMSTQTSSDYSYRNRHRIDDFGSGSDDDHDHERIRNASRNRRAIEIDEYNSEDDDADADD
LGRMRYGRMGTGASSNYDSENYIKKVEEPDVLRKSSIPNAASGVGSSGDVKKGPMFKDLA
GNRMEKIKKELEVPLNLLCYPELGKKLGLEPLTGILLHGPPGCGKTRLAHAIANETELPF
YPISATDVVSGVTGGSEENIRELFSKAKRTAPSIIFIDEIDAIASKRENSQRQTETRIVT
QLLTCMEEACNSVNSDEPTGYVLVIGATNRLDAIDSALRRPGRFAREILVGIPDESAREE
ILFVHTRKRSDKFDASVDLQKIARATSGFVGGDLEALVGKAGELALERIINERNRKSSKD
LMSEPNIVRWKKTLSPQEINKFAIKMSDFEEAIKMVQPSLTREGFSPIPDVKWEDVGALD
DARENFDSNILMRIKEPEIYEGLGLDRDTGFLLYGPPGCGKTLIAKAVANEAGANFIYIK
GPELLNKYVGESEREVRKLFDRARACAPCILFFDEVDALTSKHGNEGSRVIDGVLKQLLI
ELEGAEQRKGVFVIGATDRPLEMDKAVLRPGRFGNHIYISLPSPDGRVSILKALARSKEA
LARRKETHARFKLMPIDASVDLSAIGRSKACENYSGADLAALMDKAILAALEEKLATTAR
TSDTLTVERKHFYVALTKVHPSVSEKQMKYYDRVSKKLKGGDVDLQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaacaagcggaggaggaggaggaagagaaaggtttctccaacaaaccctactc
cgtcgaatcgattcatgcaaatcaagattctccactgctgatgatatcgtcgaccatctc
cgttcaacttactctagttatcaccgaatgaagtttcaaactctccttttttcggttcga
aaagctcttcttgcttccaacaacaatcaagcttcatatcattctcgaaggagacgaagg
aatgatgattctgacgatgatgattctgaagatgatgatcatgatcatgaaagatatagt
tctcgaaagagacgtaggaatgatgaatctcaaaatgatgattctgaaaatgatcatgaa
ataatgagcacacaaacttcgtctgattattcttatcgaaataggcataggattgatgat
tttggatctggttctgatgatgatcatgatcatgaaagaataagaaatgcttctcgaaat
agacgtgcgattgagattgatgaatataattctgaagatgatgatgctgatgctgatgat
cttggaagaatgagatatggaagaatgggcactggagcttcctctaattatgattccgag
aactacatcaaaaaagtagaggaaccggatgttttaaggaaaagttcgatccctaatgca
gcctccggtgttggcagcagtggtgatgttaagaaagggccgatgtttaaggatttagca
gggaataggatggagaagataaagaaggaattggaagtgcctcttaatttactgtgttac
cctgagttgggtaaaaagttaggtttggaaccattgacgggaattttgctgcacggacca
cctggttgtgggaaaactagacttgctcatgctattgctaatgaaactgaacttcctttt
tatcctatttctgctactgatgttgtttctggtgtcactggtggatctgaagaaaatatt
agagagcttttctctaaagcaaagaggactgctccatcaattatctttattgatgagatt
gatgcaattgcttcgaaaagagagaattcacagcgacagacggagacacgaattgtgaca
cagttattaacttgcatggaagaagcttgtaattcagtgaattctgatgaacctactggt
tatgttcttgtaattggagccacaaataggcttgatgctattgactctgctcttagaagg
cctggtcgttttgctcgagagattcttgttggcattcctgatgaatctgcgagggaagag
atccttttcgtgcatactcgaaagcgtagtgacaagtttgacgcttcggttgatctgcaa
aagatagccagagctacttcgggatttgttggtggtgatttggaagctctggtcggaaaa
gctggcgagctagcattggaaaggataattaatgaaaggaatcgtaaatcatctaaagat
cttatgagtgaacctaatatagtcaggtggaagaaaactttgtcgcctcaagaaataaat
aaatttgcaatcaaaatgtccgattttgaggaagcaatcaaaatggtacaaccttcgtta
acaagagaaggattttctcccattcctgatgttaaatgggaagatgttggtgcgcttgat
gatgcaagagaaaattttgattccaacattctaatgcgtataaaagaacccgagatttat
gagggacttgggttggatcgagacacggggtttttgctttacgggcctccaggatgtggt
aaaacactgattgccaaagctgttgccaatgaagccggagctaatttcatttatattaag
ggtcctgagcttctaaataaatatgttggagaaagcgagcgtgaagtccggaaattattt
gatcgtgcaagggcatgtgcaccttgtatacttttttttgatgaggtggatgctttgaca
tcaaaacatggtaatgaaggtagcagggttattgacggagttttgaaacagttgcttatt
gagttagaaggcgctgagcaacgcaaaggtgttttcgtgattggtgcaacagatcggcct
ttggagatggacaaagctgtcctacgtccgggtagatttggtaatcatatttatatttct
cttccaagcccagacggccgtgtttcgatcttaaaagctcttgcaaggagcaaggaagct
cttgcaaggcgtaaggaaactcatgcaaggtttaagcttatgcctattgatgccagtgtg
gatttgagcgccattggaagatcgaaagcctgtgaaaactatagtggtgccgatcttgct
gcattgatggacaaagcaatattggctgctctcgaagagaagctagccacaactgcgaga
acaagtgatacattgaccgtcgagcgtaagcatttttacgtagcattgactaaagtccat
ccctctgtgtcagaaaagcaaatgaagtactatgatcgtgtttccaagaaacttaaaggt
ggtgatgttgatctacagtga
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