Medicago truncatula (barrel medic): 25488804
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Entry
25488804 CDS
T01716
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25488804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25488804
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
25488804
Prokaryotic type
Archaeal type
TFB
25488804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
zf_Tbcl_2
DUF7573
Motif
Other DBs
NCBI-GeneID:
25488804
NCBI-ProteinID:
XP_013459402
UniProt:
A0A072UWL4
LinkDB
All DBs
Position
3:12875723..12876664
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AA seq
313 aa
AA seq
DB search
MSDAFCSDCKRATEVVFDRSAGDAICSECGLVLESHSIDETSEWRTFANESGNNDAVRVG
GPNNPLLNDGGLSTVIAKPNGESVDFLSSAVNRWQKHGSNPDRGLILAFKTIDTMAERLG
LVPIIKDRANEIYKRVQDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGGQSVEMGTIHAGDFMRRFCSNLGMNHQAVKAAQESVKKSEE
FDIRRSPITIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIKNSYKDLYPHVSKIIPTW
YAEEEDLKNLCNP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcattttgcagtgactgcaagcgagcgacggaggtggtgtttgaccgctcc
gctggtgatgcaatctgttcggagtgtggtctcgtcttggaatcacactccattgatgaa
acctccgaatggcgaacctttgctaacgaatccggcaataatgatgccgttcgtgtcggt
ggtcccaataaccctctcctcaacgatggtggtctctccaccgtcattgctaagccgaat
ggagagtccgttgattttctctcatcggctgttaatcgttggcagaaacatggttctaat
cccgatcgtggattgatccttgcgttcaaaactattgatactatggctgagaggttggga
ctggttccgatcattaaggaccgagctaatgagatatataagcgggttcaagatcagaag
tctagtaggggaagaaatcaagacgcattattggctgcttgcctctacattgcttgtcga
caagaagacaagccacgcactgtaaaggaaatttgctcggttgccaatggagccacaaag
aaggaaattggccgtgcaaaagaatacatagtgaaacaacttggtttggagaatggtggt
caatctgtagaaatgggaacaattcatgctggggactttatgagacgattttgttctaat
cttggtatgaatcatcaagctgttaaagctgctcaggaatctgttaagaaatcagaggaa
tttgatataaggagaagtcccataacaattgctgcagcagttatatacatcattactcag
ctttctgatgataaaaaacctctgaaagatatatcagttgctaccggagtcgcagaagga
accattaagaactcgtacaaggatctctatccccatgtttcaaagataataccaacctgg
tatgcggaggaagaggatctcaagaacctttgcaacccttga
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