KEGG   Medicago truncatula (barrel medic): 25488839
Entry
25488839          CDS       T01716                                 
Name
(RefSeq) transcription initiation factor IIB-2
  KO
K03124  transcription initiation factor TFIIB
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    25488839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtr03021]
    25488839
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     25488839
 Prokaryotic type
  Archaeal type
    TFB
     25488839
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF IPPT Cyclin_N Ribosomal_S27e DUF3825 HTH_23 HTH_5 Sigma70_r4_2
Other DBs
NCBI-GeneID: 25488839
NCBI-ProteinID: XP_013459446
UniProt: A0A072UV36
LinkDB
Position
3:13962336..13963817
AA seq 405 aa
MFDAFCRDCNQATDVVFDHSAGNAVCSECGLVLGSHSIDETSEWQTFSNDYGNNGSPSNP
LIVDDGLSNVIAKSNGASSDVPSSSLGRWQNSSSNPDLGLIVSFQTIDIMAEKLGLVPTI
KDRANEIYKRVEDQKSSKGRNQEALLAACVYIACRQEDKPRTIKEICLIANGATKKEIVR
AKEYIVKQLGLENGGQSIEMGIIHIGDFMGRFCSNLGMNHQAVKAATESVQNSEEFDIRR
SPISIAATVIYIITHLSDDKKSLRDISVATGVSEGTIRNTYKDIFPHVSKIIPTWYAKEE
DLKNLQPLKLNSKRVDEMVEVGMVDEIREYFVSGADNSKGIRRVIGVPEIDYFFEIVKKN
TIDDAKKEKILNKAIRKTKHSTCILAKNQLLKEYGSYAWIDSVQN
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtttgatgcgttttgcagagactgcaaccaagcgacggatgtggtgtttgaccactcc
gccggcaatgcagtctgttcagagtgtggtcttgtcttgggatctcactccatcgatgaa
acctccgagtggcaaaccttctctaacgactacggcaataatggtagtcccagtaaccct
ctcatcgtcgatgatggtctctccaacgtcattgctaagtcgaacggagcatccagtgat
gttccctcatcgtctcttggtcgttggcagaatagtagttctaatcccgatctaggattg
atcgtttcgttccaaactattgatattatggctgagaagttgggactggttcccaccatt
aaggaccgagctaatgagatatataagcgggttgaagatcagaagtctagtaagggaaga
aatcaggaagcattattggctgcttgcgtctacattgcttgtcgacaagaagacaagcca
cgcactataaaggaaatttgtttgattgccaatggagccaccaagaaggaaattgtccgc
gcaaaagaatacatagtgaaacaactgggtttagagaatggtggtcaatctattgaaatg
ggaataattcatattggggactttatgggacgattttgttctaatcttggtatgaatcat
caagctgttaaagctgctacggaatctgttcagaattcagaagaatttgatataaggaga
agtcccatatcaattgctgcaacagttatatacatcataactcatctttcggatgataaa
aaatccctgagagatatatcagttgctacaggagtttcggaaggaaccattaggaacaca
tacaaggatatctttccccatgtttcaaagataataccaacctggtatgctaaggaagag
gatctcaagaacctgcaacccttgaaactaaacagcaaaagagttgatgaaatggttgag
gtcgggatggttgatgagattcgagaatattttgtatctggggcagacaactcaaaggga
attagaagggtaattggggttcctgaaattgattatttttttgagatagtaaagaaaaac
accattgatgatgctaaaaaagaaaagatattgaacaaagctatcagaaaaaccaaacac
agcacttgcatattggctaaaaatcaactcttgaaggaatatggctcttatgcttggatc
gatagtgtacaaaattga

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