Entry |
|
Name |
(RefSeq) transcription initiation factor IIB-2
|
KO |
K03124 | transcription initiation factor TFIIB |
|
Organism |
mtr Medicago truncatula (barrel medic)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mtr00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25488839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mtr03021]
25488839
Transcription machinery [BR:mtr03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
25488839
Prokaryotic type
Archaeal type
TFB
25488839
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:13962336..13963817
|
AA seq |
405 aa
MFDAFCRDCNQATDVVFDHSAGNAVCSECGLVLGSHSIDETSEWQTFSNDYGNNGSPSNP
LIVDDGLSNVIAKSNGASSDVPSSSLGRWQNSSSNPDLGLIVSFQTIDIMAEKLGLVPTI
KDRANEIYKRVEDQKSSKGRNQEALLAACVYIACRQEDKPRTIKEICLIANGATKKEIVR
AKEYIVKQLGLENGGQSIEMGIIHIGDFMGRFCSNLGMNHQAVKAATESVQNSEEFDIRR
SPISIAATVIYIITHLSDDKKSLRDISVATGVSEGTIRNTYKDIFPHVSKIIPTWYAKEE
DLKNLQPLKLNSKRVDEMVEVGMVDEIREYFVSGADNSKGIRRVIGVPEIDYFFEIVKKN
TIDDAKKEKILNKAIRKTKHSTCILAKNQLLKEYGSYAWIDSVQN |
NT seq |
1218 nt +upstreamnt +downstreamnt
atgtttgatgcgttttgcagagactgcaaccaagcgacggatgtggtgtttgaccactcc
gccggcaatgcagtctgttcagagtgtggtcttgtcttgggatctcactccatcgatgaa
acctccgagtggcaaaccttctctaacgactacggcaataatggtagtcccagtaaccct
ctcatcgtcgatgatggtctctccaacgtcattgctaagtcgaacggagcatccagtgat
gttccctcatcgtctcttggtcgttggcagaatagtagttctaatcccgatctaggattg
atcgtttcgttccaaactattgatattatggctgagaagttgggactggttcccaccatt
aaggaccgagctaatgagatatataagcgggttgaagatcagaagtctagtaagggaaga
aatcaggaagcattattggctgcttgcgtctacattgcttgtcgacaagaagacaagcca
cgcactataaaggaaatttgtttgattgccaatggagccaccaagaaggaaattgtccgc
gcaaaagaatacatagtgaaacaactgggtttagagaatggtggtcaatctattgaaatg
ggaataattcatattggggactttatgggacgattttgttctaatcttggtatgaatcat
caagctgttaaagctgctacggaatctgttcagaattcagaagaatttgatataaggaga
agtcccatatcaattgctgcaacagttatatacatcataactcatctttcggatgataaa
aaatccctgagagatatatcagttgctacaggagtttcggaaggaaccattaggaacaca
tacaaggatatctttccccatgtttcaaagataataccaacctggtatgctaaggaagag
gatctcaagaacctgcaacccttgaaactaaacagcaaaagagttgatgaaatggttgag
gtcgggatggttgatgagattcgagaatattttgtatctggggcagacaactcaaaggga
attagaagggtaattggggttcctgaaattgattatttttttgagatagtaaagaaaaac
accattgatgatgctaaaaaagaaaagatattgaacaaagctatcagaaaaaccaaacac
agcacttgcatattggctaaaaatcaactcttgaaggaatatggctcttatgcttggatc
gatagtgtacaaaattga |