KEGG   Medicago truncatula (barrel medic): 25489234
Entry
25489234          CDS       T01716                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    25489234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mtr03000]
    25489234
   03021 Transcription machinery [BR:mtr03021]
    25489234
Transcription factors [BR:mtr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    25489234
Transcription machinery [BR:mtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     25489234
  RNA polymerase III system
    TFIIIB
     25489234
  RNA polymerase I system
    SL1/TIF-1B
     25489234
SSDB
Motif
Pfam: TBP FAM75
Other DBs
NCBI-GeneID: 25489234
NCBI-ProteinID: XP_024633947
LinkDB
Position
3:33329820..33333491
AA seq 214 aa
MLFHTDCHSPLFTQMDEQGFEEKQSVKLQNHPSGIAPTIINIVSTVNLDCKLDLQSIKLQ
APTAEYNPQRHPAVVMRIRAPESKAQINSFGMMVCTGAKNESQSKLAASKYAAIIRKMGF
PTKFKDFKIQEIVGSCDVKFPIHLERLANSHAACSSYNPVLFPWLIYEMKQPKIVLYIFN
SGKIHLKGTKSRDEIFTAFEKIYPVLTEFRKNQQ
NT seq 645 nt   +upstreamnt  +downstreamnt
atgctgttccacaccgactgccactcgcctctgttcacacaaatggacgaacaaggattc
gaagagaaacaatctgtgaaattacaaaaccatccttctgggattgctcccaccattata
aatattgtgtcaactgtgaatttggattgtaagttggaccttcaatccattaagcttcaa
gctcctactgcagagtacaatccccagcgtcatcctgctgtggttatgaggatcagggca
ccagaatcaaaagcacaaatcaattcttttggaatgatggtttgtactggagctaagaat
gagagccagtcaaaattggcagcaagtaagtatgcagcaatcatccggaagatgggcttc
ccaactaaatttaaggattttaagattcaggaaattgttggctcttgtgatgtcaagttt
cccatacaccttgaacgtcttgctaattcccatgccgcttgctctagttataacccagtg
ttgtttccatggctaatctatgaaatgaagcaaccaaagatagtcttatatatattcaac
tcgggaaaaattcatctaaaaggaaccaagtcgagagatgagatattcacagcctttgag
aaaatatatccagtgcttactgagttcaggaaaaaccaacaatga

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