Medicago truncatula (barrel medic): 25489234
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Entry
25489234 CDS
T01716
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25489234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
25489234
03021 Transcription machinery [BR:
mtr03021
]
25489234
Transcription factors [BR:
mtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
25489234
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
25489234
RNA polymerase III system
TFIIIB
25489234
RNA polymerase I system
SL1/TIF-1B
25489234
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
FAM75
Motif
Other DBs
NCBI-GeneID:
25489234
NCBI-ProteinID:
XP_024633947
LinkDB
All DBs
Position
3:33329820..33333491
Genome browser
AA seq
214 aa
AA seq
DB search
MLFHTDCHSPLFTQMDEQGFEEKQSVKLQNHPSGIAPTIINIVSTVNLDCKLDLQSIKLQ
APTAEYNPQRHPAVVMRIRAPESKAQINSFGMMVCTGAKNESQSKLAASKYAAIIRKMGF
PTKFKDFKIQEIVGSCDVKFPIHLERLANSHAACSSYNPVLFPWLIYEMKQPKIVLYIFN
SGKIHLKGTKSRDEIFTAFEKIYPVLTEFRKNQQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccacaccgactgccactcgcctctgttcacacaaatggacgaacaaggattc
gaagagaaacaatctgtgaaattacaaaaccatccttctgggattgctcccaccattata
aatattgtgtcaactgtgaatttggattgtaagttggaccttcaatccattaagcttcaa
gctcctactgcagagtacaatccccagcgtcatcctgctgtggttatgaggatcagggca
ccagaatcaaaagcacaaatcaattcttttggaatgatggtttgtactggagctaagaat
gagagccagtcaaaattggcagcaagtaagtatgcagcaatcatccggaagatgggcttc
ccaactaaatttaaggattttaagattcaggaaattgttggctcttgtgatgtcaagttt
cccatacaccttgaacgtcttgctaattcccatgccgcttgctctagttataacccagtg
ttgtttccatggctaatctatgaaatgaagcaaccaaagatagtcttatatatattcaac
tcgggaaaaattcatctaaaaggaaccaagtcgagagatgagatattcacagcctttgag
aaaatatatccagtgcttactgagttcaggaaaaaccaacaatga
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integrated database retrieval system