Medicago truncatula (barrel medic): 25489317
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Entry
25489317 CDS
T01716
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
25489317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25489317
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
25489317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR55
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
25489317
NCBI-ProteinID:
XP_024633558
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Position
3:complement(34050345..34053623)
Genome browser
AA seq
486 aa
AA seq
DB search
MESPQAKKSGLNLPAGMSTITSLRLETLSTPPSSASPRAISNLSSTPSPSKSSKCSDRFI
PCRSSSRLHTFGLIDNQSPVKEGSNEAYNRLLKSELFGPDFASPSSSPAGCGVGSPLVSP
SKNMLRFKTESCGPSSPFSPSIFGRNDGFCNEGFTPPKPPRKVPKTPHKVLDAPSLQDDF
YLNLVDWSSQNTLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGTN
GGQVQIWDGTKCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRVPSDFIGKLV
GHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNL
LVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKY
PSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSL
GRTQIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaccacaagcaaaaaaatcaggtctaaacctcccggctgggatgtcaacaata
acctccctccgtctagaaacgctatcaacacccccttcttccgcttcgcctcgcgcgata
tcaaacctttcatcaacaccctctccatcaaaatcctccaagtgtagtgacagattcata
ccttgcagatcatcttcaagactgcatacattcggattaatcgataaccaatcaccggtt
aaagaagggagtaatgaggcttataataggttgttgaaatctgagctttttggacctgat
tttgcttctccttcttcttctcctgcaggttgtggtgttggttcgccgttggtgagtccg
agtaagaatatgttgaggtttaagacggagagttgtggaccttcttcgcctttttcgcct
tccatatttggaagaaatgatgggttttgtaatgagggttttactcctcctaagcctcct
agaaaagtgcctaagacaccccacaaggttctggatgctccttcacttcaggatgacttt
tacttgaatcttgtggattggtcctcacaaaatactctagcagtgggactcgggacttgt
gtttatctctggagtgcttcaaacagcaaagtgactaagctgtgtgacttgggaccttat
gatggtgtctgttctgttcagtggaccaaggagggttccttcatatccattggtacaaac
ggtggtcaagttcagatttgggatggtactaaatgcaagaaggtcagaacaatgggaggg
catcaaacaagaacgggtgtcttggcatggaattctcgcattttggcttcaggaagcagg
gatagaaacatacttcagcatgacatgagggttccaagcgactttattggcaagcttgtc
ggccacaagtccgaggtttgtggattgaaatggtcctgtgatgacagagaacttgcttct
ggtggtaatgataatcagctattggtatggaatcagcactctcagcaaccaactttgaga
ctaacagagcacactgctgctgtgaaagccattgcttggtcacctcatcagagcaacctt
ctcgtatctggaggtggaactgctgatcggtgtattcgtttctggaacactacaaatggc
caccaattgaactctgttgacactggaagccaggtctgtaacctagcttggagtaaaaat
gtaaatgagctagtgagtacacatggttactcacaaaatcaaatcatggtgtggaaatat
ccatcactagcaaaggttgcaactctaaccggccacagcatgagagtactataccttgca
atgtctcctgatggtcagacaatagtgactggtgctggggatgagactctgcggttttgg
aatgttttcccatcaatgaaaacacctgccccagttaaagatacaggcctttggtcacta
ggccgtacccaaatccgatga
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