Medicago truncatula (barrel medic): 25489517
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Entry
25489517 CDS
T01716
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
25489517
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
25489517
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
25489517
NCBI-ProteinID:
XP_013460967
UniProt:
G8A2G3
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Position
3:complement(37777507..37780146)
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AA seq
406 aa
AA seq
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MTNTPFSLVLLFFSFFMPTLISSSLVQNPELVVQEVNRKINASSARRNLGYLSCGSGNPI
DDCWRCDSNWEKNRQRLADCAIGFGKNAIGGKNGKIYVVTDASDDNPVTPKPGTLRHAVI
QVEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGIHIH
DCKQGGNAMVRDSPRHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCEDGLIDAIYGSTAI
TISNNYMTHHDKVMLLGHSDSYTHDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFVAPNNRFSKEVTKYEDAAESEWKHWNWRSEGDLMVNG
AFFTKSGGGASSSYARASSLSARPSSIVGSITIGAGTLNCKKGSPC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacacctttctctttggttttattgttcttctcttttttcatgcctaccctc
atttcctcttcacttgttcaaaatcctgaattggtagtccaagaggtaaacaggaaaatc
aatgcctcttcagctaggaggaatttaggttacctatcctgtgggagtggaaacccaata
gatgattgctggaggtgtgactccaattgggaaaagaataggcaaaggctagcagattgt
gcaattgggttcggcaagaatgccattggtggaaagaacggtaagatttacgttgtaacc
gatgcgagcgatgacaatccggtgaccccaaagcctggaacactccgccacgccgtgatc
caagtggaaccgttatggataatttttgccagagacatggtgatcaaattaaaagaagag
ttaataatgaactctttcaaaacaattgatggtagaggagctagtgtgcacattgctggt
ggtccatgcattactatacaatatgtcacaaacattattatccatgggatacatatacat
gattgtaaacaaggtgggaatgctatggtgagggactccccacgacatttcgggtggagg
actatatcggacggtgatggagtgtctatctttggtggaagtcatgtttgggttgatcat
tgttctttgtctaattgtgaagatggtttgattgatgctatttatggttctaccgctata
acgatctctaacaattacatgacacaccatgataaggtcatgttgttaggtcatagcgac
tcttatactcatgataagaacatgcaagtcacaattgcttttaaccactttggtgaagga
ctcgttcaaagaatgccaaggtgtaggcttggatatttccatgtggtgaacaatgactac
actcactgggaaatgtatgctattggaggaagtgcaaatccaaccattaacagtcaagga
aacagatttgttgcacctaataacagattcagcaaagaggtgacaaagtatgaagatgca
gcagagagtgaatggaagcattggaattggaggtcagaaggagacttaatggtaaatggt
gcatttttcactaaatcaggtggtggagcatcatctagctatgcaagagcttcaagctta
agtgcaagaccatcttctattgttggttccattacaattggtgctggaacacttaattgt
aagaaaggttctccttgctag
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