KEGG   Medicago truncatula (barrel medic): 25489523
Entry
25489523          CDS       T01716                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    25489523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25489523
   03029 Mitochondrial biogenesis [BR:mtr03029]
    25489523
Membrane trafficking [BR:mtr04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    25489523
 Others
  Specific organelles associated proteins
   Auto phagosome
    25489523
Mitochondrial biogenesis [BR:mtr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    25489523
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 ATG16 Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_EIPR1 WDR54 Beta-prop_DCAF4 Beta-prop_SPT8 Cytochrom_D1 Beta-prop_Nup120_160 KNTC1_N PALB2_WD40 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 25489523
NCBI-ProteinID: XP_013460974
UniProt: A0A072V0W5
LinkDB
Position
3:complement(37805864..37809126)
AA seq 509 aa
MAKEEIANQAIKHAFRALRKRHLNEEGAHAAAFAALSRPIVSQASEWKEKAESLEMELQQ
CYKAQSRVSEQLVVEIAESRTLKSVIQEKETAVDDLQKELTSMRDECKQMKKDLEDKINA
HEIILSENTELKTQLEEMTIRAKSAEIEHKTLVDRMMLEKMKNAEQLNEANQLYDDMIKQ
LKASGLEKLARQQIDGIVRQGEEYADVILQSIVPSTCKHRLQAHEGGCAAILFECNSNKL
ITGGQDRAVKVWDTDSGSLISNLHGCLGSVLDLAITNDNRSVIAASSSNNLYAWDLNLGR
VHHTLTGHTDKVCAVDVSKVSSRHVVSSAYDGTIKVWDLLKGYCINTIIFHSNCNALSFS
TDGQTILSGHVDGNLRLWDIKSGKLLSEVAAHSLAVTSISLSRNGNVVLTSGRDNLHNLF
DMRSLEVSGTLKAAGNRVASNWSRSCISPDDKNVAAGSSDGSVYVWSASKADIVGTLKEH
TSSILCCTWSGLGRPLASADKNGVVCIWT
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgaaggaagaaattgcaaatcaagctatcaagcatgctttcagggctctgagaaag
cggcatttgaacgaagaaggagctcatgctgctgcttttgctgctctttctagacctatt
gtttctcaggcctctgaatggaaagagaaagcagagagtctggaaatggaacttcagcaa
tgctacaaagctcaatcccgagtatctgagcagcttgttgtggaaatagctgaatctaga
actttgaaatctgtgattcaagagaaagaaactgcagttgatgatttgcaaaaagagttg
acttcaatgagggatgagtgcaagcaaatgaaaaaggacttagaagacaaaattaatgct
catgaaatcattctaagtgagaatacagagcttaaaacacaattggaggaaatgactatt
agagccaagagtgctgaaattgaacataagacattggtggatcgcatgatgttagaaaaa
atgaagaatgctgaacaactaaatgaggcaaaccaactgtatgatgacatgatcaagcag
ctaaaggccagtggtttagaaaaacttgcaagacagcagatagatggcatagttcgccaa
ggtgaagaatacgccgatgtcattttgcagtcaattgtcccatccacatgtaaacacagg
ctccaagcacacgaaggtggttgtgctgccatattgtttgagtgtaattctaataaattg
ataaccgggggacaggatcgagcagttaaagtgtgggataccgattcaggatccttaatt
tccaatcttcatggctgccttggctctgtattagatctcgcaatcaccaacgataataga
tctgttattgctgctagcagctcaaacaacttgtatgcatgggatctcaacttgggtcgt
gtccatcatacccttactggccacacggataaagtctgtgccgttgacgtcagcaaggtt
tccagccgtcacgtcgtcagttcagcttacgacggcactataaaagtttgggacttgctt
aaaggctattgcattaacacaatcattttccacagcaactgcaatgctctttccttcagc
acggatggacagaccatactttctggacatgttgacggaaatcttcgactatgggatatt
aaaagcggaaaactactcagcgaggttgcagcacactcacttgctgtcacatcaatatct
ctttctcgaaatggaaatgttgtactaaccagtggaagggacaatttgcacaatttgttt
gacatgcgatctctagaagttagtggcacactgaaagccgccggaaatagagtggcctcc
aattggagtcgctcgtgtattagcccggatgataaaaatgttgctgccggatcatcagat
ggatctgtctatgtttggtcagcatctaaagctgatatagtcggtactctgaaggaacat
acttcttctatcctttgttgtacatggagtggcctcggaagacccttagcttcagctgac
aagaatggagttgtttgtatctggacctaa

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