Medicago truncatula (barrel medic): 25489523
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Entry
25489523 CDS
T01716
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
25489523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25489523
03029 Mitochondrial biogenesis [BR:
mtr03029
]
25489523
Membrane trafficking [BR:
mtr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
25489523
Others
Rab GTPases of specific organelles
Auto phagosome
25489523
Mitochondrial biogenesis [BR:
mtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
25489523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
ATG16
NBCH_WD40
WDR54
Cytochrom_D1
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
25489523
NCBI-ProteinID:
XP_013460974
UniProt:
A0A072V0W5
LinkDB
All DBs
Position
3:complement(37805864..37809126)
Genome browser
AA seq
509 aa
AA seq
DB search
MAKEEIANQAIKHAFRALRKRHLNEEGAHAAAFAALSRPIVSQASEWKEKAESLEMELQQ
CYKAQSRVSEQLVVEIAESRTLKSVIQEKETAVDDLQKELTSMRDECKQMKKDLEDKINA
HEIILSENTELKTQLEEMTIRAKSAEIEHKTLVDRMMLEKMKNAEQLNEANQLYDDMIKQ
LKASGLEKLARQQIDGIVRQGEEYADVILQSIVPSTCKHRLQAHEGGCAAILFECNSNKL
ITGGQDRAVKVWDTDSGSLISNLHGCLGSVLDLAITNDNRSVIAASSSNNLYAWDLNLGR
VHHTLTGHTDKVCAVDVSKVSSRHVVSSAYDGTIKVWDLLKGYCINTIIFHSNCNALSFS
TDGQTILSGHVDGNLRLWDIKSGKLLSEVAAHSLAVTSISLSRNGNVVLTSGRDNLHNLF
DMRSLEVSGTLKAAGNRVASNWSRSCISPDDKNVAAGSSDGSVYVWSASKADIVGTLKEH
TSSILCCTWSGLGRPLASADKNGVVCIWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaagaaattgcaaatcaagctatcaagcatgctttcagggctctgagaaag
cggcatttgaacgaagaaggagctcatgctgctgcttttgctgctctttctagacctatt
gtttctcaggcctctgaatggaaagagaaagcagagagtctggaaatggaacttcagcaa
tgctacaaagctcaatcccgagtatctgagcagcttgttgtggaaatagctgaatctaga
actttgaaatctgtgattcaagagaaagaaactgcagttgatgatttgcaaaaagagttg
acttcaatgagggatgagtgcaagcaaatgaaaaaggacttagaagacaaaattaatgct
catgaaatcattctaagtgagaatacagagcttaaaacacaattggaggaaatgactatt
agagccaagagtgctgaaattgaacataagacattggtggatcgcatgatgttagaaaaa
atgaagaatgctgaacaactaaatgaggcaaaccaactgtatgatgacatgatcaagcag
ctaaaggccagtggtttagaaaaacttgcaagacagcagatagatggcatagttcgccaa
ggtgaagaatacgccgatgtcattttgcagtcaattgtcccatccacatgtaaacacagg
ctccaagcacacgaaggtggttgtgctgccatattgtttgagtgtaattctaataaattg
ataaccgggggacaggatcgagcagttaaagtgtgggataccgattcaggatccttaatt
tccaatcttcatggctgccttggctctgtattagatctcgcaatcaccaacgataataga
tctgttattgctgctagcagctcaaacaacttgtatgcatgggatctcaacttgggtcgt
gtccatcatacccttactggccacacggataaagtctgtgccgttgacgtcagcaaggtt
tccagccgtcacgtcgtcagttcagcttacgacggcactataaaagtttgggacttgctt
aaaggctattgcattaacacaatcattttccacagcaactgcaatgctctttccttcagc
acggatggacagaccatactttctggacatgttgacggaaatcttcgactatgggatatt
aaaagcggaaaactactcagcgaggttgcagcacactcacttgctgtcacatcaatatct
ctttctcgaaatggaaatgttgtactaaccagtggaagggacaatttgcacaatttgttt
gacatgcgatctctagaagttagtggcacactgaaagccgccggaaatagagtggcctcc
aattggagtcgctcgtgtattagcccggatgataaaaatgttgctgccggatcatcagat
ggatctgtctatgtttggtcagcatctaaagctgatatagtcggtactctgaaggaacat
acttcttctatcctttgttgtacatggagtggcctcggaagacccttagcttcagctgac
aagaatggagttgtttgtatctggacctaa
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integrated database retrieval system
