Medicago truncatula (barrel medic): 25489816
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Entry
25489816 CDS
T01716
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25489816
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
25489816
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
25489816
NCBI-ProteinID:
XP_013461492
UniProt:
A0A072V117
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Position
3:complement(46319420..46322016)
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AA seq
369 aa
AA seq
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MEKEKEKELVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGK
HLKTLTKHPRENIRAFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKS
PSVKVEKGESAKVEKVNGNGSSKLSSGNVKAQNVDVKIEKTDRTSNIKAKEEKPVSAAKK
ISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNACDPIRVAVTV
ESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQ
RKQENEKIEQKALFDCERGLQPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCV
NCNNRWKFC
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaaagagaaagagttggtcgaattgtacgaagccgcgaagaaagcggcg
gatgcttccacctccaccgataatagtcccagcgaagaaacccgatgcctcgatgcgctt
gaacagctcaagaattttccggtcaattacaaaattctcgtcaatacccaggtgggaaaa
catcttaaaactctcaccaagcatcccagggagaacattcgggcttttgctgttgactta
attgcgatatggaaagacgtaattatcaaggaaacaagtaaaaataagaatggggcctct
gattctaaggttgagtcaacgaatggggagagagctaaagctggcaaattgcaaaagagt
ccttcagtgaaggttgagaaaggtgaaagtgccaaggtggagaaagttaatgggaatggt
tcatcaaagctgagctctggaaatgtaaaggcacaaaatgtggatgttaaaattgagaaa
actgatcgtacctccaacatcaaagcgaaggaggaaaaaccagtatctgcggcaaagaaa
atttcatccagcgctgctgctccaccaaagctgaagactatgatcaaatctaacgattca
gcgcgagacaaaataagggaacttctccgagatgctttagcgaaggtctttgaagaggca
gatgaagatatgatggatgaagtgaatgcatgtgaccctattcgtgtggcagtgacagtg
gagtccgtattatttgaaaactggggtccttcaaatggagcccaaaaggtcaagtatagg
tccttaatgtttaatcttaaggatcagaagaacccagatttccggagaaaagttctgctt
ggtactgttgagccacagcggctggccgtcatgagctcagcagaaatggctagtgagcaa
aggaagcaagagaatgagaaaatcgagcagaaagctttgttcgactgtgagcgcggactt
caaccaaaagctactactgatcaatttaagtgtggtcggtgtggacaaaggaaaaccacc
tattaccaaatgcaaactcgcagtgctgacgaacctatgacaacctatgtcacttgtgtt
aactgcaacaaccgttggaagttttgttag
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