Medicago truncatula (barrel medic): 25489943
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Entry
25489943 CDS
T01716
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25489943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25489943
03036 Chromosome and associated proteins [BR:
mtr03036
]
25489943
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
25489943
Coactivators
SAGA/TFTC/STAGA complex
25489943
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
25489943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
25489943
NCBI-ProteinID:
XP_024634192
LinkDB
All DBs
Position
3:complement(50840113..50847368)
Genome browser
AA seq
914 aa
AA seq
DB search
MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSHLSDSDAGSNNSFSQSLPT
WPTSSHDNQTDSQNQEPKIEQQQEQPSSETEQGPIVEPIQNVASQDASNLNLSHSQSQDE
SLQRQTLPVSHQQSQTNEVIKSEKEPVFNNEAIKTNNPNEQSQYAKLQQMSNQQASVNEQ
PISQVNRSKQVPFGLLLPILIPQLPKDRAMQLQTLFNKLKRDEIPKEHFVRLMKGIVGDQ
MLRIALTKVQQQTKTNTGSSGQQPPVRMPTVTSSGTKFNDPHALAQLHQRSMNAAADHSH
NASSAIQVKSEPTYSTMDISAKKPQEHDVRVVQSNQLPTSSSIAVSQETERSAVHMQGLN
KQQQQHIHFPSTYGGSGGNYSHFSGTTTSSSSSFRPQPHPHDSHIRQIPHPSIGLNHLGA
ERQSSFNDPKRMPGGSVSTVVNNTSSHQTSNSWQTSAEQNSGLFSSTSYVKKEPNDLSIE
QQHRHHLSKLHGLPSVNSGQNEQGSGINQGTVKDEFSRGSLASTSMAHTTSASLLAPNTA
SHFASQPDPTVSVSSQIPASTSGVMSKTPLKKPPLGQKKPLEALGSSPPPPSKKQKVSSL
EPSIDQLNDVTAVSGVDLREEEEQLFSGPKDDSRVSEASRRVVQEEEESLILLKAPLQRK
LIEIMTECGLKGMGNDVERCLSLCVEERMRGVISNIIRMSKQRVDIEKTRHRTVVTSDVR
QQIMTMNRKAREEWEKKQAETEKLRKLNDVEGSSGVDGDKEKDEGRNKATKVNREVDDKM
RTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDTASGSQQTKDISRKSSPSSGRS
TKDNQERERKGPTSLGNSAARKFGKNHSHGSQTRIARSISVKDVIAVLEREPQMSKSSLL
YRMHERIHSDTSTE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacccatctatagtaaagcttctcgaagacgatgaggatgaaactatgcattccggt
gcagatgtcgaagccttccaagcagcattgaatcgagacattggcggagatgcttctaat
tctcacctttctgattctgatgcaggaagcaataattcattcagtcaatcattaccaacg
tggccaacttcgagccacgacaaccagactgactctcaaaatcaggagcctaaaattgaa
caacagcaagagcaaccttcttctgaaacggagcaaggacctatcgtggaaccgatacag
aatgttgcctcacaggatgcaagtaatcttaatttatcacacagccaatcacaagacgaa
tctctacaacgccagactttacctgtttctcatcaacaatctcaaacaaatgaagttatc
aaatctgaaaaagaacctgtttttaacaacgaggcaatcaaaacaaataatcccaatgaa
caatctcagtatgcaaagctgcagcagatgagtaatcaacaggcctcggtcaacgaacaa
cctattagccaagtcaatcgtagtaaacaggtaccatttggcttgttgctccctatattg
attccccaacttcccaaggacagggcaatgcaacttcaaactttatttaacaaattgaag
agagatgaaatacctaaagaacattttgtacggcttatgaaagggattgtgggggatcag
atgcttaggatagcattaacaaaagtgcaacaacagacaaaaaccaatacaggttcttct
ggacagcagccccctgtaaggatgccaactgttacttccagtggaacaaaatttaacgat
ccccatgcattagcacaactgcatcagagaagtatgaatgctgctgcagaccattctcat
aatgcttcttcagctatccaagtgaagagtgagccaacctattcaactatggacatcagt
gctaaaaaacctcaggaacatgatgttcgagtagtgcaatcaaatcaattaccaacatcc
agttctattgctgttagtcaagaaactgaaagatctgccgttcacatgcaaggcctaaat
aagcagcaacaacagcatatacatttcccatcgacatatggaggcagtggtggtaactac
agccatttttccgggacaaccactagttcatcatcatctttcagaccacaacctcatcct
catgattcacacataaggcaaattccacatccgagcattggtctaaatcacttaggtgca
gaacgtcagagttctttcaatgatcctaagagaatgccaggtggatctgtgtcgactgtg
gtaaataatacatcatcacaccaaacttcaaattcttggcaaacatcagcagaacaaaat
tcaggcttgttttcatctacttcatatgtaaaaaaggaacctaatgacctttctattgag
cagcaacataggcatcatttatctaagttgcatgggttgccttctgttaattctggtcaa
aatgaacagggtagtggtatcaatcaaggcactgtaaaggacgagttttcaagaggttct
ttagcatccactagcatggcgcatacaacatctgctagcttgcttgcgccaaatactgct
tcccattttgcatctcaaccagatccaactgtctctgttagctctcagatcccagctagc
acttctggtgtcatgtcaaagacaccactaaaaaaacctcctcttggccagaagaaacca
cttgaggcacttggttcttcacctcctcctccaagtaagaaacaaaaggtgtcttctctg
gaaccaagcattgatcagcttaatgatgttacggctgttagtggtgttgatcttagggag
gaggaagaacagttattttctgggcccaaggatgacagtcgagtttcagaagcatctcga
agagttgtccaagaagaggaggaaagtctgattttactgaaagctccattgcagagaaaa
ttgattgagattatgaccgagtgtggcttgaaaggcatgggtaatgatgtggaaagatgc
ttgtcactgtgtgtggaggaaagaatgcgtggagtaataagtaacataattagaatgtca
aaacagcgggttgatattgagaaaacaagacatcggactgttgtcacttcagatgttcga
cagcaaatcatgacaatgaataggaaagcaagggaagagtgggagaaaaaacaggccgaa
acagaaaagctccggaaactaaatgatgtagagggtagttccggagttgatggtgacaag
gagaaagatgagggtcgtaataaagcaacaaaggtaaacagggaagtagatgacaaaatg
aggacaaatgctgcaaatgtggcagcccgagctgctgttgggggagatgacatgctgtca
aagtggcaattgatggctgagcaagccaggcagaagcgtgaaggggggacggacactgca
tctggttctcagcaaactaaagatatcagtcgcaaatcttcaccatcatcaggaaggagc
acaaaagataatcaagaaagggagagaaaaggtccaacttcgcttgggaactcagcggct
aggaaatttgggaaaaatcattctcatggatctcaaactcgcatagctcgtagcatctct
gtgaaggatgtaattgcagtcttggagagggaacctcagatgtccaaatcatcactcttg
tatcgaatgcatgagaggattcattctgatacttcaaccgaatga
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