KEGG   Medicago truncatula (barrel medic): 25490092
Entry
25490092          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    25490092
   04120 Ubiquitin mediated proteolysis
    25490092
  09126 Chromosome
   03083 Polycomb repressive complex
    25490092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25490092
   04121 Ubiquitin system [BR:mtr04121]
    25490092
   03036 Chromosome and associated proteins [BR:mtr03036]
    25490092
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    25490092
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     25490092
   Cul7 complex
     25490092
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     25490092
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     25490092
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB DapH_N
Other DBs
NCBI-GeneID: 25490092
NCBI-ProteinID: XP_013461980
UniProt: G7ZWL4
LinkDB
Position
3:54320926..54321813
AA seq 158 aa
MSSYTKKITLNSSDGETFKVSKMVARESQVIKHMIEEDCANEAIPLQDVTANILAMVIEY
CKKHVDAAAASSDGKPSEDDLEDWDAEFVKVDKGTLFNLIDAANYLEIKSLLDLTCQTVA
DMMKGKTPEEIRNTFNIENDFTPQEEEEVRRENQWAFE
NT seq 477 nt   +upstreamnt  +downstreamnt
atgtcttcatacaccaagaagatcactctcaacagttccgacggcgaaaccttcaaagtt
tccaagatggtggcacgtgaatcgcaggtgatcaagcatatgatcgaggaagattgtgcc
aatgaagcaatccctcttcaggacgtcaccgcaaatattttggctatggtgattgaatac
tgtaagaagcatgtcgatgccgccgcagcaagttctgatggaaaaccttcagaagatgat
cttgaggattgggatgctgaatttgtgaaggttgataagggtacgcttttcaacctcatt
gatgctgcaaactatttggaaatcaagagcttgttggatcttacttgccaaactgtggcg
gacatgatgaaagggaagacaccggaggaaattcgaaacacttttaacatcgagaacgat
ttcactccgcaggaagaggaagaagttcgaagggaaaatcaatgggcatttgaatga

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