Medicago truncatula (barrel medic): 25490224
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Entry
25490224 CDS
T01716
Name
(RefSeq) 26S proteasome regulatory subunit 10B homolog A isoform X2
KO
K03064
26S proteasome regulatory subunit T4
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
25490224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mtr03051
]
25490224
Proteasome [BR:
mtr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
25490224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
nSTAND3
PRS7_OB
DUF815
IstB_IS21
Prot_ATP_ID_OB_N
AAA_7
TIP49
Parvo_NS1
AAA_14
RNA_helicase
AAA_33
Mg_chelatase
Sec8_N
AAA_18
Sigma54_activat
AAA_28
AAA_3
TsaE
AAA_24
NPHP3_N
AAA_lid_PRS2_C
NACHT
ABC_tran
bpMoxR
AAA_11
AAA_25
ATPase
NB-ARC
ATPase_2
ResIII
PhoH
AAA_30
Vpu
Motif
Other DBs
NCBI-GeneID:
25490224
NCBI-ProteinID:
XP_013462160
UniProt:
A0A072VDE6
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Position
3:complement(55983706..55987963)
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AA seq
399 aa
AA seq
DB search
MSDTTEDAVRRRNAVAEYRKKLLQHKELESRVRSVRENLRASKKEFNKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFGKE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccacagaagatgccgttcgacgccgtaacgcagtcgccgagtatcggaag
aagcttcttcagcacaaggaattggaatccagagttcgatctgtgagggagaacttgcga
gcttcaaagaaagagtttaacaaaacagaagatgatttgaagtctcttcaaagtgtcggg
cagatcattggcgaagttctcaggcctcttgacaatgaacgcttgattgttaaagcaagc
agtggtcctagatatgtggttggctgccggagtaaagtggataaggaaaaacttacttct
gggactagagtggtacttgatatgacaacactcactataatgcgtgctcttcctcgtgaa
gttgatccagttgtgtacaatatgttgcatgaagatcccggtaatattagttattctgct
gttggtggtttatctgatcagatcagggaattgagggaatcaattgaattacctctaatg
aatcctgagctctttcttagagttggaattaaacctcccaagggtgttctcctttatggg
cctcctggtacgggtaaaacattgttggctagggctattgccagtaatatagatgctaac
ttcctaaaggttgtttcaagtgccataattgataagtacattggagaaagtgccaggtta
attagagagatgtttgggtatgcacgtgatcaccagccatgcatcatttttatggacgag
atcgatgccattggtggtcgccgtttcagtgagggaacaagtgcagatcgtgagattcag
agaacgttaatggagctgcttaatcaacttgatggctttgatcaacttggaaaggttaaa
atgatcatggcaacaaaccgacctgatgtacttgaccctgctctcctacgtcctggaaga
ttggatagaaaaattgaaattccattgccaaatgaacaatcaaggatggaaattcttaag
atccatgctgctggaattgctaagcatggtgaaatagactatgaagcagttgtgaagctt
gcagaggggtttaatggagctgatctccgaaatgtgtgcactgaagctggaatgtcagca
attcgagcagaacgtgactatgtgatccacgaagattttatgaaggctgtaaggaaattg
aatgaggcaaagaaacttgaatctagtgcacactacaatgctgattttggaaaagaataa
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