Medicago truncatula (barrel medic): 25490229
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Entry
25490229 CDS
T01716
Name
(RefSeq) ribosomal RNA small subunit methyltransferase I isoform X1
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25490229
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
25490229
Ribosome biogenesis [BR:
mtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
25490229
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
HTH_7
HTH_22
Motif
Other DBs
NCBI-GeneID:
25490229
NCBI-ProteinID:
XP_024633877
LinkDB
All DBs
Position
3:56017347..56021965
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AA seq
353 aa
AA seq
DB search
MLLRRLPWMAFSTAAPLPLYSFSSSIPKQLTFSPLSFCSTSELHLTQHPDNNKPEHETDN
RRSQLLKPGLYLVGTPIGNLEDITFRALRVLNSAHVILSEDTRHSGKLLHHYNIKTPLMS
YHKFNESQREQLVLRRLKQGEIVALISDAGTPGISDPGMELAKLCVSENVPVVPIPGPCA
LISALSASGLSTDEFTFVGFLPKHSGSRRKRLMASAEQTATQIFYVPPHKLSQFLEEGSS
IFGDTRRCVIAREMTKFHEEFWRGTFGEASKEFSIRQPKGELTILIEGHVNSKVEPPSDI
ELENELRELIENGESLSTAVKLVAERTSVSRKTIYSLALRKFGKQLEVEDDSS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcggcgattaccctggatggcgttttccaccgccgcaccacttccattgtat
tctttttcttcttccattccaaagcaacttaccttttcccctttatccttctgctccacc
tccgaactccatctcactcaacatccagataataataaacctgaacacgaaactgataat
cgtcgctcgcagcttctcaaacccggtctttatctcgttggaacacccattggaaatctt
gaagacatcaccttcagggctctccgggtgttgaactccgctcatgtgatactatcggaa
gacacgaggcactctgggaaattgcttcatcactacaatatcaaaacaccccttatgagt
tatcacaaattcaatgaatcacaaagggaacaacttgtgcttaggaggttgaaacaaggt
gagattgtggcacttataagtgacgctggaacgcctggtataagtgatcctggtatggag
ttggccaaattatgtgttagtgaaaatgttcctgttgttccaatcccaggtccatgtgct
ttgatatcggctctttctgcctcgggtttatccactgatgaatttacatttgttggtttt
cttccaaaacattctggatcaagaagaaaaaggctcatggcttcggcggagcaaacggca
acacaaatattttacgttcctcctcacaagctttctcagtttcttgaagagggttcgtca
attttcggagatacaaggagatgtgttattgctcgagaaatgacaaagtttcatgaagag
ttttggcgcggtacttttggcgaagccagcaaagaattttctattcgtcagccaaaggga
gaacttaccatattgattgaagggcatgtgaattctaaagttgaacctccatcagacatt
gagcttgagaatgaattaagagaattaattgaaaacggcgagagtctttccacggctgtt
aaattggtagctgaaagaacatcggtgagtagaaaaactatatattcacttgcgttgcgg
aaatttgggaagcagcttgaagtggaggatgattcaagttag
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