Medicago truncatula (barrel medic): 25490275
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Entry
25490275 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25490275
03036 Chromosome and associated proteins [BR:
mtr03036
]
25490275
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25490275
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
25490275
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
25490275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-rbx1
RING_XB3-XBAT31
zf-RING_4
Prok-RING_4
zf-ANAPC11
zf-UDP
zf-RING_10
DUF3719
U-box
Motif
Other DBs
NCBI-GeneID:
25490275
NCBI-ProteinID:
XP_013462235
UniProt:
A0A072VDM7
LinkDB
All DBs
Position
3:57092059..57094357
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AA seq
411 aa
AA seq
DB search
MVRIKLSRSIGPLPRRIFRSSLPLTPWYLPCCPPMIDGKCPNCSYDPSTDEEEIVGGSSK
PTTETNDENDDVLDNYCSFCIELPDRPVTTPCGHNFCLECFKKWMKQGKQTCPNCRTTIP
TKMASTPRINTQLAITMRMAKLARSKGVGGSITPKVHCIDHYAILVTIPKDHFGPIVAEN
DPTRNRGVLVGDKWKDRMECRQWGAHFPHIARVAGQKNQGAQSVVLSGGYTQDEDHGEWF
TYTGSGGRNQFLDHQFNNTNEALRLSCRKGYPVRVVRSHKEKQSSYAPEAGVRYDGVYRI
DICWSEFGKNGEKVCRYLFVRCDNEPAPWTSDLSGDYPRTLPFIEEFRDAVDIIERNGDP
SWDFDEEKGCWLWKKPPPLSKRPLNIVDPIENALNPPLKRTKGAGGKAVMK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtacggatcaaactctcaagatccatcggacctttgccaagacgtatttttcgatca
tctttgccattgactccatggtatcttccatgttgcccgccgatgattgatgggaaatgc
cctaattgttcgtatgatccttctaccgacgaagaagaaattgttggtggatcttcaaaa
ccaactactgaaaccaacgacgaaaacgatgatgtgcttgataattattgttccttctgc
atagagttgcctgacagacctgtcactactccatgtgggcacaatttttgcttagaatgt
tttaagaaatggatgaaacaaggaaagcaaacttgcccaaattgtaggactacaattcca
acaaaaatggcgagtactccacgaatcaacacacaattggcaatcaccatgcgtatggct
aaactagccagatcgaaaggtgttggaggaagtattactccaaaagttcattgcattgac
cactacgccattctcgtgactattccaaaagatcattttggacccatcgtagctgagaat
gatcctactaggaatcgtggggttcttgttggtgataaatggaaggataggatggaatgc
aggcaatggggtgctcattttccccatattgcgagggttgcaggtcaaaagaaccaaggt
gctcagtctgttgttttgtctggtggttacacacaagatgaagatcatggtgagtggttc
acttataccggaagtggtggaagaaatcagttcttggaccatcaatttaataatacgaat
gaggccttgcgactcagttgccgaaaaggctatcctgttcgtgttgttaggtcccacaag
gagaaacagtcctcttatgcaccggaagcaggagtgagatacgacggggtttatagaatt
gatatatgttggtccgaatttggaaaaaatggtgagaaggtttgcaggtatttgtttgtg
aggtgtgacaatgaaccagcgccttggacaagtgatttatctggagattatccccgtaca
ctaccttttatcgaggagtttagggatgcagttgatattattgaaaggaatggcgatcca
tcatgggactttgatgaggaaaaaggttgctggttgtggaagaagcctccaccattaagt
aagaggccactgaacattgtggatcctatagagaatgctctgaatcctccactgaagcgg
acgaaaggtgctggtggcaaggctgtgatgaagtga
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