Medicago truncatula (barrel medic): 25490580
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Entry
25490580 CDS
T01716
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00906
Carotenoid biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
25490580
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mtr01006
]
25490580
Enzymes [BR:
mtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
25490580
Prenyltransferases [BR:
mtr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
25490580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Antigen_C
Motif
Other DBs
NCBI-GeneID:
25490580
NCBI-ProteinID:
XP_013459640
UniProt:
A0A072UW65
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Position
3:complement(19127775..19130994)
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AA seq
395 aa
AA seq
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MSGVLLWVNCGLKENAISLMGLGGRDVRTQRRFRHCSGISFACFSSAVVEPTRSSEERVY
EVVLKQAALVKEQRKDIKKRGLNLDDKPIEGDFTNGELLSSAYDRCGDVCAEYAKTFYLG
TQLMTQERRKAIWAIYVWCRRTDELVDGPNASHITPKALDRWEQRLTDVFEGRPYDMYDA
ALSDTVTKYPVDIQPFKDMIEGMRLDLRKSRYNNFDELYLYCYYVAGTVGLMSVPVMGIE
PQSKASTESIYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFRGR
VTDKWRNFMKGQIKRARMFFDEAEKGVSELSSASRWPVWASLLLYRQILDSIEANDYNNF
TKRAYVGKAKKLLSLPVAFGIATFGPQKLAKMTTR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgttcttctttgggtgaattgtggactcaaagagaatgccatttccttaatg
ggtcttggaggaagagatgtgagaactcaaaggaggtttagacattgttctggaattagc
tttgcttgtttttcaagtgcagttgttgaacctacaagatcctcagaggagagagtgtat
gaagtggtgttgaagcaagcagctttagtgaaggaacaaagaaaagatattaaaaagaga
ggtttgaatttggatgataagcctattgaaggtgatttcaccaatggggaacttttgagt
tctgcttatgatagatgtggtgatgtatgtgctgagtatgccaagacattttacttaggc
acacaattgatgactcaagagagaagaaaagccatatgggccatttacgtgtggtgcaga
agaacagatgagttagtggatggtcctaatgcttcacacatcacaccaaaggctttggac
agatgggaacaaagattaactgatgtttttgaaggacgtccttatgatatgtatgatgct
gcactttcagatacagtcacaaagtaccctgttgatatacagccatttaaagacatgatt
gaagggatgaggctggacctgagaaaatcaagatacaataactttgatgaactataccta
tattgctactatgttgctgggactgtgggccttatgagtgttcctgtaatgggcatagaa
ccacaatcaaaagcttcaactgaaagcatctacaatgctgcattggcacttggcattgct
aatcaacttaccaacatacttagagacgttggagaagatgctagaagaggaagagtttac
cttccacaagatgaattggcacaagctggcctatcagatgatgacatttttagaggccga
gtaacggacaagtggcgtaatttcatgaagggtcaaataaagagagcaagaatgtttttt
gatgaagcagagaagggagtttcagagctcagttcagctagtagatggcctgtttgggca
tctttgctgttgtataggcagatattagattctattgaagctaatgactacaataacttc
actaaacgggcttatgtaggaaaggctaaaaagctcttatcacttcctgttgcttttgga
atagcaacttttggcccacaaaagttggccaaaatgactacaagatga
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