Medicago truncatula (barrel medic): 25490814
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Entry
25490814 CDS
T01716
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00730
Thiamine metabolism
mtr01100
Metabolic pathways
mtr01240
Biosynthesis of cofactors
Module
mtr_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
25490814
Enzymes [BR:
mtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
25490814
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
25490814
NCBI-ProteinID:
XP_013460170
UniProt:
A0A072UXM9
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Position
3:28414094..28417529
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AA seq
650 aa
AA seq
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MASVHANVTSVVCKNGNHDSQLKFPNSVFLPRFDVVGRASNAWRKELAPSSIALVPRATL
AFDPPTTNADKTKPKKYTVNPASPDFLPLPSFEECFPKSTKESREVVHEESGHVLKVPFR
RVHLSGDESHFDSYDTSGPQNISPRIGLPKLRKEWIDRREKIGGPRFTQMYYAKQGIITE
EMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPTIVGRNFLVKVNANIGNSAVVS
SIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIA
EDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
KENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKD
VQVMNEGPGHVPMHKIPENMKKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKDGVIAYKIAAHAADLAKQHPHAQAWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEKHGYG
DVEEALKQGMNAMSAEFLAAKKTISGEQHGEAGGEIYLPESYLSSKEGTI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtgcatgctaatgtgacatcagttgtttgcaagaatggcaaccatgattct
caattgaagttcccgaattctgtgttcttgcctcggtttgacgttgttggacgcgcttca
aatgcttggaggaaggaactagctccatcttccattgctttggtacctagagccacattg
gcattcgaccctccaactactaatgcagacaaaaccaaaccaaagaagtacactgttaac
cctgcttctcctgattttcttccacttccttccttcgaagagtgctttccaaagagcaca
aaagaatccagggaagtcgttcatgaggaaagtggtcatgtgctcaaagttccatttcga
cgagttcacctgtccggtgatgaatcacactttgatagctatgacaccagtggtccgcaa
aatataagtccaaggataggactaccaaaattgcgcaaagagtggattgataggagagaa
aaaataggtggtccaagattcactcagatgtactatgcaaagcagggaatcattaccgag
gagatgctttattgtgcgactcgtgagaagctcgacccagagtttgtgaggtcagaagtt
gcccgtggacgagctatcatcccttccaacaagaagcacttggagttagagccgacaata
gttggaagaaactttttggtgaaagtaaatgcaaacattggaaattcagcagttgtaagc
tctatagaagaggaagtttacaaggttcaatgggcgacaatgtggggagctgacacagtc
atggatctctctaccggtcgccacatccatgaaacgcgagagtggatcttacgcaactct
gctgtaccagttgggactgtacctatttatcaagcacttgagaaagttaacggcattgcg
gaagatcttacttgggagattttcagggataccttgattgaacaagctgaacaaggtgtt
gattacttcaccatccatgctggagtacttcttaggtatattcctttaactgcaaagcgc
atgacaggaatagtttctagaggaggatcgattcatgcaaagtggtgcttagcttatcac
aaagagaatttcgcttatgagcactgggatgacatacttgacatctgcaatcagtatgat
gtggcactatccattggtgatggtttaagacctggatccatttatgatgcaaatgacaca
gctcaatttgccgagcttttgacacaaggcgagctgactcgtagagcatgggaaaaggat
gtacaggtgatgaatgaaggaccaggacatgttccaatgcacaagattcctgaaaacatg
aaaaaacagctagaatggtgtaatgaagcacctttctacactcttggtcctttaacaacc
gatattgcccctggttacgatcacatcacctctgctattggtgctgcaaatatcggtgca
cttggtactgctcttctctgttacgtgactccaaaagaacatctcgggttgccaaaccga
gatgatgtgaaggatggagtgatagcttacaagattgctgctcatgctgctgatttagcc
aaacaacatccacatgctcaagcctgggacgatgccttaagcaaggcgagatttgaattc
cggtggatggaccagtttgctttgtctttggatccgatgacagccatgtccttccacgat
gaaactttgccatcggaaggtgcaaaggtggctcatttctgctcgatgtgtggccctaaa
ttctgttctatgaagataaccgaagatgtgagaaaatatgctgagaaacatggttatggg
gatgttgaagaagctttgaagcaggggatgaatgctatgagtgcagaatttcttgctgcg
aagaaaactatcagtggagaacaacatggtgaagctggtggagagatttacttgccagaa
tcttacttaagttctaaggaagggactatataa
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