Medicago truncatula (barrel medic): 25490931
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Entry
25490931 CDS
T01716
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04142
Lysosome
mtr04144
Endocytosis
mtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
25490931
04142 Lysosome
25490931
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
25490931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25490931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
25490931
Membrane trafficking [BR:
mtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
25490931
Exosome [BR:
mtr04147
]
Exosomal proteins
Proteins found in most exosomes
25490931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
25490931
NCBI-ProteinID:
XP_013460296
UniProt:
A0A072UXN6
LinkDB
All DBs
Position
3:29327432..29338799
Genome browser
AA seq
1704 aa
AA seq
DB search
MAANAPITMKEALTLGSVGINPQFITFTHVTMESEKFICVRETGPSNSVVMIDMNMPMQP
LRRPITADSALMNPNTRILALKAQVPGTTQDHLQVFNIETKTKMKSYQMNQQVVFWKWVT
PKTLGIVTQTSVYHWSIEGDGEPVKVFDRTANLANNQIINYRCDPSEKWLVLIGIAPGNP
ERPQLVKGNMQLFAVDQQRSQALEAHAASFASFRVPGNDKDSILICFASKTINAGQVTSK
MHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDME
TATAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELA
VNLAKRGNLPGAEELVVQRFQELFAQTKYKEAAELAAESPRGILRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQG
AVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQSKVLEI
NLVTFPNVADAILANGMFTHYDRPRIAQLCEKAGLFIRALQHYSELPDIKRVIVNTHAIE
PQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGADACIKLFEQFKS
YEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAK
LPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV
VERMDADLWDKVLNPENEFRRQLIDQVVSTALPESKSPDQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPSVGEVAVEAQLYEE
AFAIFKKFNLNVPAVNVLLDNLKTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIES
FIRADDSTHFLEVIKAAEDGDVYHDLVRYLLMVRQKTREPKVDSELIYAYAKIDRLGEIE
EFILMPNVANLPVVGDRLYDDTLYEAAKIIFAFISNWAKLAVTLVKLQQFQGAVDAARKA
NSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRPEKLMEHIKLFSSRLNIPKVIRACDEQQHWKELTYLYIQ
YDEFDNAATTVMNHSPEAWEHMQFKDIIVKVASVELYYKAVHFYLKEHPEVINDLLNVIA
LRVDHTRVVDIMRKAGHLKLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESTDLH
DNFDQIGLAMKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDHLYKDCMETCSQSGDR
ELSEDLLVYFIEKGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYILQFIREYS
SKVDELIKEKIEAQIEEKAKEKEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGYAPPPPQ
PPMGGMGMPGMPPMPPFGLPPMGY
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaacgcccccatcaccatgaaagaagccttaacgttgggaagcgttgggatc
aatccacaattcatcacattcacacatgtgacgatggaatctgagaaattcatttgtgtt
cgagaaaccggtccttcgaatagtgttgttatgattgatatgaatatgcctatgcaacct
ttgagacggcctatcactgctgattctgctcttatgaaccccaataccagaattctcgct
cttaaagctcaagttcctggaactactcaggatcatttgcaagtgtttaacattgaaacg
aaaacaaagatgaaatcatatcaaatgaaccaacaggttgtgttttggaagtgggtaacc
ccaaagacgttaggcatagtcactcagacatctgtgtatcattggtcaattgaaggtgat
ggtgagccagtgaaggtgtttgatcgaacagctaatctcgcgaataatcagatcatcaat
tatcgttgtgatcctagtgaaaagtggttggttttgattggaattgctcctggtaatcct
gagagaccacaacttgtaaaaggaaacatgcaactcttcgcagttgatcaacaacgaagt
caggctcttgaagcacatgctgcctcgtttgcctcgtttcgagttcctggaaatgataag
gattcaattcttatttgttttgcatccaagaccattaatgctggacaggttacatcaaag
atgcatgtcattgaacttggtgcccagccaggcaagccatcgttttctaaaaaacaagca
gatctgttctttcctccagactttgctgatgactttcctgtatcaatgcagatttcaaat
aaatacggcttgatatatgtgatcacaaaacttgggcttttatttgtctatgatatggag
actgccactgcagtttacagaaatcgaatcagtcccgatcctatatttttgacctcagaa
gcatcctcggtagggggattttatgccataaatagacgtggccaagtgttgctggctact
gtgaatgaggcaaccattgtaccttttgttagtggccagctaaacaatttggaacttgct
gttaatcttgctaaaagaggaaacctccctggtgcagaagaattggttgttcagcgtttt
caagaattatttgctcagaccaaatataaggaagctgcagagcttgctgcagagtcacca
cgaggaatacttcgtactcctgacacagtagctaaatttcagagtgtacctgtacaagct
ggacaaacaccaccgttgttgcaatactttggaactctgttaaccaggggtaaactcaat
gcttttgagtcgttggaactgtcacgacttgtggtaaatcagaacaagaagaatcttttg
gaaaattggctagcagaggacaaactggaatgcagtgaggagcttggcgaccttgtgaag
acagttgataatgaccttgcactgaaaatctatattaaagctagagctacaccgaaagtt
gttgcagcttttgcggaaaggagggaattcgacaagatcctgatttattccaagcaggtt
ggatatacacctgattacatgttccttctgcaaacaattttacggacagacccgcagggt
gctgtcaattttgctctcatgatgtctcaaatggagggaggttgccccgttgactacaac
acgataacagacctctttctccagaggaacttgatccgcgaggcaacagcatttttgttg
gatgtgctaaagccaaacctacctgaacatggatatcttcaatcaaaggttctggaaatt
aatctagtgacgtttccaaatgttgctgatgctatattggccaatggcatgttcactcat
tatgatcgcccacgcattgctcaactctgtgaaaaggccggccttttcatacgtgctctt
cagcattatagtgagttgcctgatatcaaacgtgtcatcgtgaatacacatgccattgag
ccacagtctttagttgagttctttggaaccctttctcgagaatgggcacttgagtgtatg
aaagatcttttactggtcaatcttaggggaaatcttcagataattgttcagactgctaag
gaatattctgagcagctgggagctgatgcatgcatcaaactctttgagcaatttaaatcc
tatgaaggactatattttttcttgggttcatacttgagctccagtgaggatcctgaaatt
cacttcaagtacattgaagccgctgctaaaactggacaaattaaggaggtagagcgtgtg
actagggaatcaaacttctatgatgctgagaagacaaagaactttttaatggaggctaaa
cttccagatgcacgcccattgattaatgtgtgtgatcgttttggttttgttccagatctc
acacattatctttataccaacaatatgctgcgctatattgagggttatgttcaaaaggtc
aatcctggaaatgctcctctagttgtaggacagctgttagatgatgaatgccccgaagat
ttcattaaaggtctcatactttcagttcgttctcttttgccagttgagcctttagttgaa
gagtgtgagaagaggaatcgtctccgcttgttgactcagttcttggagcatcttgtgagt
gaaggaagccaggatgtacatgtgcacaatgctttgggtaaaatcatcattgacagcaac
aacaatcctgaacatttcctcacaaccaacccatattatgattctcgtgttgttggtaag
tattgtgagaaacgagatcctactcttgctgttgttgcttaccgaagagggcaatgtgat
gatgagcttgttaatgttaccaataaaaattccttgttcaaactccaagcgagatatgtt
gtggaaaggatggatgctgacctctgggacaaagttcttaatcctgagaatgagtttaga
agacagttgattgatcaagtggtttccaccgctttgcctgaaagcaagagtcctgatcaa
gtttcagctgcagtgaaagcttttatgaccgctgatcttccccatgagttaattgagctt
cttgaaaagattgtgctacaaaattctgctttcagcggaaacttcaatctgcaaaatctg
ttgatcctcactgcaataaaggcagatccttcaagagttatggattacataaataggttg
gataactttgatggaccctcagtgggggaggtggcagtggaagcacaactatatgaagaa
gcatttgctattttcaagaaatttaatttgaatgttccggctgttaatgttctgctagat
aaccttaagactattgatcgtgcggtggagtttgctttccgggttgaagaagatgctgtt
tggagccaggtggcgaaggctcaactgagagaaggattagtaagtgatgcaattgagtcg
ttcatccgggcagatgattcaactcatttcttagaggttataaaggctgctgaagatgga
gatgtataccatgacctggtaaggtaccttctcatggttaggcagaagaccagagagccc
aaggtggacagtgaactcatttatgcttatgctaagattgatcggcttggagaaattgaa
gagtttatattgatgccaaatgttgccaatttaccagttgttggagaccgcttgtatgat
gacactctatatgaggctgccaaaattatatttgcttttatctctaactgggctaagtta
gcagtcacattggttaagcttcaacagttccagggtgctgttgatgctgccaggaaagca
aacagttcaaaaacttggaaggaagtttgtttcgcttgtgttgatgctgaggaattccgc
ttagctcaaatttgtggtctcaatgtcatcattcaggtggatgatttggaggaggttagt
gagttttatcagaacaggggatgcttcaatgaactcatatctcttatggagagtgggcta
ggattggagcgggctcatatgggtatcttcactgaattgggagttctttatgcaagatat
cgtcccgagaaactaatggaacacattaagttgttctcaagccggcttaatattccaaag
gttattcgggcatgtgatgaacagcagcactggaaagaacttacatacttgtacatccaa
tatgatgagtttgataatgctgcaaccactgtaatgaatcactctcctgaagcatgggag
cacatgcaattcaaagatattatagttaaagttgcaagtgtggaactctactataaagct
gttcacttctacttgaaagaacatcctgaagtaataaatgatcttctaaatgtgattgct
cttcgtgtggaccatactcgtgtagtagatataatgcgaaaggctggccatctcaaattg
atcaagccatacatggtcgcagtccaaagtaataatgtctctgctgtcaatgaagctcta
aatgaaatttatgttgaggaagaggactatgacagacttcgagaatcaacagatctgcat
gacaactttgatcagataggtcttgcaatgaagattgagaagcatgaacttcttgaaatg
aggcgtgttgctgcatacatctataagaaagcaggaagatggaagcaatccattgctttg
tcaaaaaaggaccatctttacaaggactgtatggaaacttgctctcaatctggtgaccgc
gaactatcagaagatttgcttgtctactttattgagaaggggaagaaagagtgttttgca
tcatgtctctttgtctgctatgatattatacggccagatgttgctcttgagttggcttgg
atgaataacatgattgattttgctttcccatatatcttacaatttatccgagagtattca
agcaaggtagatgagcttatcaaggaaaaaattgaagcacaaattgaggagaaagctaag
gagaaggaggagaaggaagtaattgctcagcagaatatgtatgcccagttgctaccactt
gctttgccagcaccaccaatgccaggaatgggaggagggtatgctcctcccccaccgcaa
cctcctatgggtggaatgggaatgccgggaatgccaccaatgcctccttttggcttgcct
ccaatgggttactga
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integrated database retrieval system