Medicago truncatula (barrel medic): 25491143
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Entry
25491143 CDS
T01716
Name
(RefSeq) chaperone protein ClpC, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mtr03110
]
25491143
Chaperones and folding catalysts [BR:
mtr03110
]
Heat shock proteins
HSP100
25491143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
UVR
TniB
AAA_14
AAA_18
AAA_28
NACHT
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
25491143
NCBI-ProteinID:
XP_013461653
UniProt:
A0A072V2V0
LinkDB
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Position
3:48554869..48562204
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AA seq
922 aa
AA seq
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MARVLAQSINVPGLVVGHKQSQHKGSGKSKRSVKMMCASRTIGLRMPGFSGLRTINHLDT
MLRPGLDFHAKVSMAISSRRARAKRIIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESADNVT
ATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDDALIAAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEFVRNQDFEKAGELRDKEMD
LRAQISALVEKGKEMSKAESEAADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKM
EDTLHKRVIGQDEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLREVFQRLKNKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSE
GNVIVLNGTSGTQESLPEALAI
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggttttggctcagtcgattaatgttcctggcctagtggttgggcacaagcaa
agtcaacataagggatcgggaaaatctaaaagatcagttaaaatgatgtgtgcttcgcga
acaattggattaagaatgcctggtttctcaggacttcgtaccatcaatcatttggatact
atgctgagacctggactagattttcatgccaaggtatcaatggcaatttcttcacggcgg
gcaagggctaagagaatcatacctagagccatgtttgagcgtttcacagagaaagcaatc
aaagtgataatgttagctcaagaggaagcaaggcgtcttggtcacaattttgttggaaca
gagcagattctactgggtcttattggtgaaggcactggtatcgccgccaaggttttaaag
tctatgggaatcaaccttaaagatgcacgggtggaagtagagaagataattggaaggggt
agtggatttgttgctgttgagattccgtttactcctcgtgcaaagcgtgtattggaactt
tcactcgaggaagctcgccaacttggtcacaattatattggatcggagcacttgcttcta
ggtcttcttcgagagggtgagggagtagcagcacgtgttcttgaaaacctaggcgctgat
cctactaatattcgcacacaggttattcgcatggtgggtgagagtgctgacaatgttact
gctactgttggctcaggaagtagtaacaataaaacgccaactttggaggagtatggaacc
aatttgaccaagctagcagaagagggaaagttggatcctgttgtgggaaggcaaccacaa
attgaacgtgtcacccaaattttaggccgtcgaaccaaaaataatccttgtcttattgga
gaacctggtgttgggaagacagcaattgctgaaggtcttgctcagcggattgcaaatggt
gatgtacctgaaacaatcgagggaaaaaaggttataaccctagacatgggtttgcttgta
gccggaaccaaataccgtggtgagtttgaggagaggttgaagaaactgatggaagaaatc
aaacaaagtgatgatataatactttttatcgatgaagtgcacacactaattggagcagga
gcagccgaaggtgcaattgatgctgctaacatactaaaaccagctcttgcaagaggtgaa
ctacagtgtattggagccaccacattggatgaatacaggaagcacatcgaaaaagaccca
gctttggagagacgattccagccagttaaagtaccagaaccaactgttgatgaaaccata
caaatactgaaaggacttagagaacgttatgaaattcaccacaagctccgatatactgat
gacgctcttatagctgctgcgcaactttcataccagtatatcagtgatcgatttttgccc
gacaaagccattgatttgattgatgaagctggttcacgagtccgtcttcaacatgcacag
ttgccagaagaggcaaaagaacttgacaaggaggtcaggaagattgttaaagagaaagag
gaatttgttcgcaaccaagactttgaaaaggctggagaactacgtgataaagaaatggat
ctaagggcgcagatctcggcacttgtagagaaaggcaaggagatgagcaaagcagagagt
gaggcagcagatgaaggtcctattgtgactgaagttgacattcaacatattgtgtcctcc
tggacaggcattcctgttgataaagtctcagcagatgaatctgatcgcctcctcaagatg
gaagatactttacacaagcgagtcattggtcaggatgaagcagtagaagccattagccgg
gctatccgtcgagcacgggttggattgaagaaccctaaccgtccaattgctagcttcatc
ttttctggtccaactggtgtggggaagtctgaattggccaaagcattggctgcctactac
tttggctctgaagaagccatgattcgtcttgacatgagtgagtttatggaaaggcacact
gtctccaaacttattggttcacctcctggatatgttggttacaccgaaggtggtcagttg
actgaagcagttcgtcgtcgtccttacactgttgtactctttgatgagatcgagaaagct
catcctgatgtattcaacatgatgcttcagatccttgaagatggaagactaacggacagt
aaaggccgaactgtggatttcaagaacacacttcttataatgacgtcaaatgttggaagc
agtgtgattgagaaaggaggccgccgaattggattcgatcttgattatgatgagaaagat
agcagttataatagaatcaagagtttggtgactgaagaactaaaacaatacttcaggcca
gagtttttaaataggttggatgaaatgattgttttcaggcaactcacaaaattggaggtg
aaggaaatagcagacataatgctcagggaagtgtttcagagactgaagaacaaagaaatt
gaacttcaagtaacagaaagatttagggacagggtggttgacgaaggttataatcctagc
tatggagccaggcctctaagaagagccatcatgcgacttttggaggatagcatggctgag
aagatgctcgccagagagatcaaagagggtgactccgtaatagtggatgttgattccgag
ggtaatgtgattgttctcaatggtaccagcggtactcaagagtcgttaccagaggctctt
gctatataa
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