Medicago truncatula (barrel medic): 25491385
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Entry
25491385 CDS
T01716
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25491385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
25491385
Membrane trafficking [BR:
mtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
25491385
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
25491385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
TPR_2
WD_LRWD1
TPR_1
TPR_8
TPR_12
TPR_CcmH_CycH
Clathrin
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
25491385
NCBI-ProteinID:
XP_013454740
UniProt:
A0A072UH84
LinkDB
All DBs
Position
4:complement(3281702..3295633)
Genome browser
AA seq
931 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REEPVASMDNSGKIIWAKHNEIQTVNIRSVGADAEIADGERLPLAIKELGTCDLYPQSLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSSDGEYAVRETTSKIKIFSKTFQ
EKKSIRPTFSAERIFGGTVLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDASFYILKYNRDVVSSYLDSGRSVDEQGVEDAFELLHEMSERVRTGIWVGDCFIYTNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVVGYTLLLSLIEYKTLVM
RGDLERANEILPSIPKEHHNSVAHFLESRGMIEDALEVATDPEYRFDLAIQLGRLEVAKD
IAVEVKSESKWKQLGELAMSTGNFEMAEECLKHAMDLSGLLLLYSSIGDAEGISKLATLA
KEQGKNNVAYLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK
VNPKAAESLADPEEYPNLFDDWQVALAVESKAAETRGVYHPAEEYINHAGKSHVTLVDAF
RNMQIEEGDQPLENGDSNHELTEHNGEEDYTEGHEEQNGEEDYTEEQEEQNGEEGSQDDA
VVVDADSSDGTVLINGNEADEELSTNKEGSV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgaaatcaagcgaaagcttgcgcaaagatcagaaagagtgaagtct
gtggatctacatccaacagaaccatggattctagcaagtttatactccgggactgtctgt
atctggaactaccaatctcagaccatggctaagtcttttgaggttactgagttacctgtt
aggtcagccaagtttattgcacgcaaacagtgggttgttgcaggagcagatgatatgttt
attcgtgtatataattacaacacaatggataaagttaaagtatttgaggcacactcagat
tacattaggtgtgtggctgttcatcccacccttccctatgtgctatcgtcgtcggatgat
atgctcataaagctttgggattgggaaaaaggctggatctgtacccagatatttgaggga
cattctcattatgtcatgcaagtgacattcaaccctaaagatacaaatacctttgccagt
gcatctcttgatcggaccataaagatttggaatcttggttctcctgacccaaattttaca
ttggatgcacatcaaaaaggagtgaactgcgttgattattttacaggtggtgacaaacct
tatctaattactggttctgatgatcacacggccaaggtatgggattatcagaccaaaagt
tgtgtccagactctagatggtcacactcacaatgtatctgctgtatgctttcatcctgaa
cttcctattatcattactggctctgaggatggtacagtccgcatttggcattcaacaact
tataggcttgagaacacattgaactatggtcttgaaagagtttgggctattgggtacatg
aagggttcacgtcgagttgtgattggctatgatgaaggaactataatggtcaaacttggt
cgagaagaacctgtagctagcatggacaacagcgggaagatcatctgggctaagcataat
gagattcaaactgtcaatataaggagtgtaggagcagatgcggagattgctgatggagaa
aggttaccattggctattaaggagttgggcacctgtgatctctatccacaaagtttaagg
cacaatccaaatggaaggtttgttgttgtttgtggggatggtgagtatattatatatact
gccttggcatggagaaataggtcatttggttcagcactggaaattgtttggtcttcggat
ggagagtatgctgtgagggaaactacttcaaaaattaaaattttcagcaaaactttccag
gaaaagaagagtatccgaccgaccttttcagcagaacgaatatttggtggcactgtattg
gcgatgtgctcaaatgatttcatctgcttttatgattgggctgaatgcagattgattagg
cgcattgatgtcaatgtgaaaaacctctactgggctgatagcggtgatctagtggcgatt
gctagtgatgcatcattctacattctaaagtacaaccgtgatgttgtttcatcatactta
gatagtgggagatctgtggatgagcaaggtgttgaagatgccttcgagctcctgcatgaa
atgagcgaacgtgtcaggacaggaatctgggttggggactgttttatctacaccaattct
tcttggaggctcaattactgtgttggtggtgaggtaacaacaatgtttcacttggaccgt
ccaatgtacttgttgggatatcttgccagccaaagtagggtttatttgattgacaaagaa
ttcaatgttgtgggctacacactgcttttaagcttgattgagtacaagactcttgtgatg
cgtggtgatttggaaagggctaatgaaattctgccatcaattccaaaagagcatcataac
agtgtggctcatttcctcgaatcacgaggcatgatagaggatgctcttgaagtagctact
gatcctgagtacagatttgatctagccatacagcttggaaggttagaggttgcaaaggat
attgctgtagaagtgaagagcgagtccaaatggaagcagttgggagaattagccatgtct
actggaaattttgaaatggcggaggagtgtttaaaacatgcaatggatttgagtggattg
ttacttctatattcttctataggagatgcggaaggaatatcaaaactggcaactcttgct
aaagagcaagggaagaacaatgttgcttacctttgcttatttatgttgggtaaacttgaa
gactgccttcaattgttagtagaaagcaatcggattccagaggctgccttgatggctcga
tcatatcttccaagcaaggtctcagagatagtggcaatatggagaaaagatctcagcaag
gttaatccaaaagctgctgaatctttggctgatcctgaggagtatcctaatttgtttgat
gattggcaagttgcacttgctgttgaatccaaagctgcagaaacaaggggtgtttaccat
cctgcagaggagtatattaaccatgctggtaaatcacatgtcacccttgttgatgctttc
agaaatatgcagattgaagaaggggatcagcctcttgagaatggggactctaatcacgag
ttgaccgaacataatggagaagaggattatacagaggggcacgaagaacaaaatggagaa
gaggattacactgaggagcaggaagaacaaaatggagaggaaggaagccaagatgatgca
gttgtagttgatgctgattcttctgacggtacagttctcattaatggtaacgaggctgat
gaagagttgagtactaataaagaaggatcagtgtaa
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