Medicago truncatula (barrel medic): 25491517
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Entry
25491517 CDS
T01716
Name
(RefSeq) (-)-germacrene D synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
25491517
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
25491517
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Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
ANTAR
TryThrA_C
Motif
Other DBs
NCBI-GeneID:
25491517
NCBI-ProteinID:
XP_039688514
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All DBs
Position
4:6596158..6600519
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AA seq
558 aa
AA seq
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MSLAAPSPVDSTQHTVPDIRRPNINFSPSVWGHIFLQYDSESMGIINDNMKQQVQMPKEE
VKKIFLSCKNDVSQQLNLIDSLHRLGISYHFESEIDEALKQIYTKFTNNKEITTNEGGLH
FLALAFRLLWQKGYQISSEIFEKFKNNEENFNEKLSKDVQGMWSLYEATQLRVHNEDILD
EALDFTYSHLNSYINTQLSPFLCTQIRRCLNTPFHKGVPRLETWYHISSYNEEPSHDKVI
LNFAKLDFNMMQKMYQKELGGITKWWKESDFGTKVPYARDRVVQGYFWLLTMSYEPRYTL
ARKLGTKLALCLSLLDDTYDAFGTVEELELFTQAIQRWDISLIQSLPECMKVVFNTILEL
WDEYETTIVENGKSSLLLHFINWQNPTWLKQNGAMKDLFQLTMNTKLMELYLLHSHFNLL
SFLGLGEFSNKELLDWIFSDPTIINAAAAIARLTDDKSSHKFEQQRVHVASAVECCMKQY
DMSQEEAYKLILKEIEDYWIVMNEECLKLDCIPSPVVESIVNVARVAEFTYENFEDKYTN
GELLKDYIVKLILKPISI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgcagctccctcaccagttgattcaacccaacatacggtccctgacattagg
cggccaaatataaattttagtcctagtgtttgggggcatattttccttcaatatgattct
gaatccatgggaatcattaatgacaacatgaagcaacaagtacaaatgccaaaagaagaa
gtaaagaagatttttctatcttgcaagaatgatgtttcccaacaactaaacttgattgac
tcattgcatcgtttgggaatatcttatcattttgaaagtgaaattgatgaagcattaaaa
caaatctacacaaaatttactaacaataaggaaataaccactaatgaaggtggccttcac
tttcttgcgttagcatttcgtttgctctggcaaaaaggatatcaaatttcatcagagata
tttgaaaaattcaaaaataatgaagaaaacttcaatgaaaagctttccaaagatgtacaa
ggaatgtggagcttgtatgaagctacacaattaagggttcataatgaagatatactagat
gaagcacttgatttcacatactctcacctcaattcctacatcaacactcaattgagtcct
tttctatgtacacaaatacgtcgctgcttaaatacaccttttcacaagggagttcctagg
ttggaaacatggtatcacatttcttcatacaatgaagaaccttcccatgataaagttatt
ttgaattttgcaaaattagatttcaatatgatgcagaagatgtaccaaaaagaactcggg
ggtatcaccaagtggtggaaagaatcagactttggaacaaaagttccttatgcaagggat
agagttgtgcagggttacttttggctattaaccatgtcctatgaacctagatataccctt
gcaagaaagttagggacaaaattggcattatgcctatctcttttagatgatacttatgat
gcatttggtacagttgaagaacttgaactcttcacacaggcaatccaaaggtgggatata
agtctcattcaatcccttccagagtgcatgaaagttgtatttaatacaattttagaattg
tgggatgaatatgagacaacaattgtagagaatggaaaatcaagtttattgttgcatttt
ataaattggcaaaatcctacttggttgaagcaaaatggtgcaatgaaggatttattccaa
cttacaatgaatacaaagctaatggaattatatcttctacactctcacttcaacttacta
tcttttcttggtcttggagaattttcaaacaaagagttacttgattggattttcagcgac
ccaacaatcatcaatgctgcagcagctattgctagactcaccgatgacaaatcctcacat
aagtttgagcagcaaagagtgcatgttgcttctgcagttgaatgttgcatgaagcaatat
gatatgtcacaagaggaagcttacaaactcattctgaaagagatcgaagattattggata
gttatgaatgaagagtgtctcaaattagactgcatcccaagcccagtggtcgaaagtatt
gttaatgtggcgcgagtagccgagttcacatacgaaaactttgaggataaatacacaaat
ggggaattgctgaaagactacattgttaaactgattctaaaacctataagcatttag
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