Medicago truncatula (barrel medic): 25491581
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Entry
25491581 CDS
T01716
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
25491581
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
25491581
Transfer RNA biogenesis [BR:
mtr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
25491581
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
DUF7812
Motif
Other DBs
NCBI-GeneID:
25491581
NCBI-ProteinID:
XP_013455005
UniProt:
A0A072UIX7
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Position
4:complement(7684770..7700047)
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AA seq
787 aa
AA seq
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MAVRAVNTYSLLRPSSPSLSTVPRFFSPHHPLPSALRFHPPSSSHVCHTQTRSIKSLFET
VMEELQAKRKLRKKIVSVNASSSNTELLNEEHVEDRLVKRSLQKGLLLEFKKDSDKILLA
VAQRPDGKKNWMVSDQNGVTSSIKPQQVTYIVPGISNFDQADITHFVQKAQYNMDPSLLE
FAWFELHEKNKSVTVEEMAEIIFGRVEPLESYSAHLLLSKDEIYFTILESKGLRCVYGPR
PSEQVEELIRRKVAKEAAEKEFQNFIKLLGSAKSMPSHDKPSKSSWQDDEKIWSRIESLE
AYAIDACISDKQRETAGIILKEMGLAKTSSSAVNLLIDIGYFPVHVNLDLLKLRIPTDHL
EKITSAAQSLLSDSSDPDEINRKNLTNLKVYAIDVDEADELDDALSATKLQDGRINIWIH
VADATRYVQPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVV
LHDDGSIAECSVFNSVIKPTYMLTYESASELLNLNLEEEVELRILSEAANLRLNWRRQQG
AVETATLEARIKVSNPEDPEPSINLYVENQADPAMRLVSEMMILCGEAIATFGSRNNIPL
PYRGQPQSDINLSEFSHLPEGPVRSFALVKIMRAAEIDFRKPARHGVLGIPGYVQFTSPI
RRYLDLLAHYQIKAFLRGEPPPFTSGNLEGLASGVNEKVRAVRKLSNSSLRYWILEYLRK
QPKERRYRALVLKFLKDRIAALLLVEVGFQATAWVSVGSQIGDEVVVKVEQSHPRDDIIY
VKEVARG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcgagcagttaacacctactcgctcctccgcccttcttccccatctctctcc
accgtcccccgcttcttctccccacaccaccctctcccctccgctctccgcttccatcct
ccctcctcctcccatgtctgccatactcaaactcgctccatcaaaagcctcttcgaaacc
gttatggaagaacttcaagccaaacgtaaactccgcaagaaaatcgtttccgttaacgct
tcttcttcaaacacggaactattgaatgaagagcatgttgaagatagacttgtgaagcgt
tccttgcaaaaaggtttgcttttggaattcaagaaagattctgataaaatattgctagca
gtagctcagagacctgatggcaagaagaactggatggtttcagatcagaatggtgtcact
agttccatcaagccacaacaagtgacatatattgttcccggcatatccaattttgaccaa
gcagatatcacacattttgttcagaaagctcagtacaacatggacccatcactacttgaa
tttgcttggtttgagctacatgaaaagaataagtccgtgacagttgaagagatggctgag
ataatttttggtcgtgttgagcctcttgagagttattctgctcatctcttgctatcaaaa
gacgaaatatacttcactatacttgaatctaaaggattgcgttgcgtttatggacctcga
ccaagtgagcaggttgaggagcttattcgtagaaaggttgcaaaggaagctgctgagaaa
gaatttcagaacttcattaaactgttaggctctgcaaaatcaatgccttcacatgataaa
ccttccaaatcttcatggcaggatgatgagaaaatttggagcagaattgagtcacttgaa
gcatatgctattgatgcttgtataagtgataaacaaagggaaacagccgggataatacta
aaggaaatgggtctggcaaaaacatcatcttcagctgtaaatctcttgatagatattggg
tattttcctgtacatgtcaatcttgatttgttgaaattgagaattcccactgatcacttg
gaaaagatcacatcagctgcccaaagtcttctatcagactcatctgatccagacgagatt
aacaggaagaaccttactaacctgaaggtctatgccattgatgttgatgaagctgatgag
cttgatgatgctctgagtgcaacaaagttacaagatggtcggattaacatttggatacat
gttgcagacgcaactagatatgttcaacctggaagtattgtggatagggaggctatgaga
aggggaacttctgttttcttgcccactgctacatattctatgtttccagaaaatcttgcc
atgggagctatgagtttgagacaaggggaggtttgtaatgctgttactgtatcagttgtg
ctgcatgacgatggcagcattgcagaatgttcagtgttcaactcagtgattaaaccaact
tacatgttaacatatgagagcgcatcagagctactcaatttgaaccttgaagaggaggtt
gaacttagaattttgtctgaggctgcaaatcttcggttaaattggcgccgccagcagggt
gcagtcgagacagcaacattagaagctcgcatcaaagtgtctaatccagaggatccagag
ccatcaataaacctttatgtagaaaatcaggcagaccctgcaatgcgattagtctctgag
atgatgatcctctgtggcgaagctatagctacatttggatctcggaataacattccttta
ccctacaggggacaacctcaatcagatataaatctttctgaattttcccatcttccagaa
gggcctgttaggagctttgccctagtcaagataatgcgtgcagctgaaattgatttcagg
aagccagcacgccacggggttttgggaattcctggttatgttcaatttacctctcccatc
cgtagatatttggaccttcttgctcattatcagataaaggcatttcttagaggcgagcct
ccaccctttacatctggtaatctcgaaggtctagcatcaggtgtaaatgagaaagttaga
gcagtgaggaagctctccaacagtagtctccgttactggatactagaatatttacgaaaa
caaccaaaagagagaagataccgtgctttagtccttaaatttttgaaagatcgcattgca
gctctgttgttggttgaggttggatttcaagctactgcttgggtctcagttggatcacag
ataggggatgaagtagtggttaaggttgaacagtcacatccacgtgatgatattatttat
gtgaaggaggttgcaagaggttga
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