Medicago truncatula (barrel medic): 25492293
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Entry
25492293 CDS
T01716
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
25492293
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
25492293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
25492293
NCBI-ProteinID:
XP_013455839
UniProt:
A0A072UVK7
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Position
4:27492606..27502544
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AA seq
1031 aa
AA seq
DB search
MIAEKPIWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKFVSTDLTNDLTNDESSQ
RLLATLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGSGTTEFGSGEPPDIENWK
VAMTLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMSNGICTTVLRGHSSLVKGVAWD
PIGSFIASQSDDKTVIIWKTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGF
QKPRHSAPVLERGEWSATFDFLGHNAPIIVVKFNHSMFKKHLSTTEEVKSVPAGWSNGAS
KTGNKEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACS
LDGSVATFHFEAKELGQRLSDTELDELKRSRYGDVRGRQANLAESPAQLLLEAASTKQTP
SKKVVANPQNQTIAKAYVDTRVGAKSVGAKNVEPQVEPNKKSDGPVGGDALNKITTSARI
SSPVKQREYRRPDGRRRIIPEAVGVPVQQENISGAVQSQELGFPVMSSEHQRGNNGVVSN
NDTVRTSTLGGAPGRNSDLKERSGVTARATISESLVIEKVPASSGRDGTINVEQLGNSTT
TGSHAALSIRIVDKKSGEDTLPICLEARPREHAVNDIAGVGNASMMRETEIACTRGPQTL
WSDRISGKVTVLAGNANFLAVGCEDGCLQIYTKCGRRAMPTMMMGSAAIFVDCDESWKLL
LVTRKGSLYLWDLFSRTCLLQDSLVSLVASSPSSSAKDTGTIKVISAKLSKSGSPLVVLA
TRHAFIFDMSLKCWLRVADDCFPASNFASSWSLGSIQSGELAALQVDVKKYLARKPGWTR
MTDDGVQTRAHLEAQLASSLALGSPNEYRQCLLSYVRFLAREADESRLREVCESFLGPPT
GMAEEASSDKSLAWDPVVLGMRKHKLLIEDILPAMASNRKVQRLLNEFMDLVSEYEIADT
NHDQRNPVLLKTSSPVTNLIESGPLGTYVNDTPEDSMDNNTRVVESRENFTTAANEASAH
DQVVQDTPDQE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacctatatgggttaggcatgaaggcatgcaaattttctccattgat
gttcaacctggtggccttaggtttgctactggtggtggtgaccacaaggttcgtatatgg
aatatgaagtttgtttctactgacttaacaaatgacttaacaaatgacgagtcttctcag
aggcttcttgcaaccctgcgggatcattttgggtctgtcaactgcgtaaggtgggctaag
catggaaggtatgttgcatctgggtcggacgatcaggtgatattaattcatgagaggaag
cctggttcaggtaccactgaattcggcagtggagagccaccggatattgaaaactggaaa
gtcgcaatgactttgagagggcacactgcagatgtggtggatcttaattggtctcctgat
gattccacattggccagtggtagtttggacaacaccatccatatatggaatatgagtaat
ggcatttgcacaactgttctaaggggccactctagcttggttaagggcgttgcttgggat
cctattggatcttttatagcaagtcaatctgatgataaaacagtcattatctggaaaact
agtgattggagtcttgctcacaggacagatggtcactgggctaaatcacttggatcaacc
ttcttcagacgacttggatggtctccatgtggtcattttatcaccactactcatggtttc
cagaagccaaggcattctgcccctgtccttgagagaggggaatggtctgcaacttttgac
ttcttaggacacaacgctccaattattgtggtcaagttcaaccattcaatgttcaaaaag
catttgtctaccaccgaggaagtgaagtctgtgcctgccgggtggtccaatggggcttcc
aagactggaaataaagagccacagccgtacaatgttattgcaattggaagtcaggatcga
actataactgtttggactactgcaagtcctcgtcctctttttgtggccaagcactttttt
actcaaagtgttgtggatttatcctggagccctgatgggtattcactttttgcctgttcc
ttggatggatcggttgctacatttcattttgaggcgaaagaacttggtcagagactcagt
gatactgagttagatgagctgaagagaagtcgctacggtgatgtgagaggtcgtcaagca
aacttagcagagagtccagcacagttattgctagaagcagcttctaccaagcaaacacca
agcaagaaggtggttgctaatccgcaaaatcagacaattgcaaaagcttatgttgataca
cgtgttggtgcaaaaagtgttggtgcaaaaaatgtggagcctcaagttgaacctaataag
aagagtgacggtcccgttggtggtgatgcattaaacaaaattacaacctctgcacggatt
tctagccctgtgaagcaaagagaatatagacgtcctgatggaaggagaagaattattcca
gaagcagttggagttcctgttcagcaggaaaatatttctggtgcagttcaatcccaagaa
cttggcttccctgtcatgtcctctgagcaccaaaggggtaacaatggagttgtatctaac
aatgataccgtaagaacaagtaccttaggtggagcacctggcagaaattcagatttaaaa
gaacgctcaggggttaccgccagggctacgatttctgagagccttgtgattgagaaggtt
ccggcctcttctggcagagatggaaccatcaatgttgagcagttgggaaattcgacgact
accggttctcatgccgctctttcgattaggatagttgacaagaaaagtggggaggatact
ttacctatttgtttagaagcaaggccgagagaacatgctgttaatgacattgcaggggtg
ggaaatgcatccatgatgagggaaacagaaattgcttgcactagagggcctcaaacactt
tggtctgataggatatcaggaaaagtcactgttttagctggaaatgcaaattttttggcg
gttggttgtgaggatggatgcctgcagatttacacaaagtgtgggagacgagcaatgcct
accatgatgatgggatctgcagcaatatttgtagactgtgatgaaagttggaagctgttg
ctggtgactagaaaaggatcactttatttatgggatttattcagtcgaacctgtctcctt
caagactcgttggtttctcttgttgcttcaagtcctagctcatctgctaaagatacaggc
accattaaagttatatctgcaaagctatcaaagtctggttctcctcttgttgttttggca
actcgtcatgctttcatatttgacatgagtctcaagtgttggttaagggttgctgatgac
tgcttccctgcatcaaattttgccagctcttggagtttgggctctattcaaagtggtgaa
ctggctgctttgcaggtcgatgttaaaaaatatttggcccgcaagccaggttggactaga
atgactgatgacggagtgcagacacgtgctcacttggaagctcagttggcctcttctttg
gctttgggatcccccaatgaatatcgccaatgcctattgtcctatgtacgatttcttgca
agagaagcagatgaatctcgattacgagaagtctgtgagagtttccttggacctccaaca
ggcatggctgaagaagcatcatccgataagagtttggcatgggatcctgttgtgcttgga
atgaggaaacacaaactcctcatcgaagacattcttccagccatggcttcaaataggaaa
gtccagagactgctcaacgaattcatggatctagtatccgaatacgaaattgctgatact
aatcatgatcaaagaaatccagtattactcaagacatcttcacctgtcactaatctaata
gagagtggtcccttaggaacatacgtaaatgacactcctgaggacagcatggacaataac
actcgggtggtagaaagtcgtgaaaatttcactactgctgctaatgaagctagtgcacat
gatcaagttgttcaggatacaccagatcaggaatga
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