Medicago truncatula (barrel medic): 25492354
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Entry
25492354 CDS
T01716
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25492354
03036 Chromosome and associated proteins [BR:
mtr03036
]
25492354
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
25492354
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
25492354
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
25492354
microRNA pathway
RISC loading complex
25492354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
25492354
NCBI-ProteinID:
XP_024637454
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All DBs
Position
4:complement(28773584..28780353)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSRRGGANHYDPRRNQLSPATSQQSSVNAPGSGRGRGANHPDSHRNQPSPPISQQSSINA
LLSGRGAGRGSHAGHTVPSSTQTPVTVTASSSTSSPVIYHPSVVAPVAAGSSSVSTVPSS
SLPPTTALLSSELEKKLTLETVPEASAPSSQKATRFPDRPGFGQVGRKIRVRANHFHVQV
ATNKVLHHYDVLIAPEIASKKVSRDVINQLVKMHKESLLGNRIPAYDGRKSLFTAGPLPF
TSKVFVINLVDENKGSSSGSDTKKREREFKVTIKLASEPDLNHLAQFLRRLQLDCPYETI
QALDITLRATPSEMYTVAGRSFFSPRLGAQGPLGGGTEYWKGYYQSLRPTQMGLSLNIDV
ASRAFYEPILVTDFISKNFKLNFSRRLSDQDRVKITKALRGLKVRFSRGEIIRSYKVTGV
SKEPLRDLTFMLDDKVTRKKVVDHFHERYGTVLKHPLLPALQAGSDTRPMYFPMELCQIE
PGQRYSKRLNEEQVTNLLRANCQRPHQRESDIKNIVKQHRFNIDEVVCEFGINVREELAL
VDARVLPPPTLKYGGESKINPMMGQWNMMKHKVVNGGKVEFWSCLSFSRLNPTQFCAELA
IICQAKGILFNRDPLVPIAPANSNEIEKELEEFDKYCKAKLNSTNQKGRLQLLIVILPDF
KGRFYDQIKRECETKLGIVTQCCEPRKVAKMNKMYLENLALKINVKVGGRNTVLNDAVIY
NIPLVTDKPTIIFGADVTHPHPGEDSSPSIAAVVASMDWPCVTKYRGMVSSQIHREEIIQ
DLYTETKHPQKGTVPGGMIRELLLAFYRSNNKRKPERIIFYRDGVSEGQFSQVLLYEMDA
IWKACASFEEGYLPKVTFVVVQKRHHTRFFPVSSDQTDKSGNIMPGTVVDTTICHPREFD
FYLNSHAGIQGTSRPTHYHVLFDENNFSADQLQGLTNNLCYTYARCTRSVSIVPPAYYAH
LLASRARCYISDVENHDSGSASGNRSAPNSVATLPSIMGNVLEVMFYC
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgcggtggcgcaaaccattatgatcctcgccgtaaccaactttctccggcg
acttctcaacaatcttccgtcaatgctccaggatcaggccgtggccgtggtgcaaaccat
cccgattctcaccgtaaccaaccttctccgccgatttcacaacaatcatccatcaatgct
ttactatcaggccgtggtgctggtcgtggttcacacgccggacacaccgttccatcttcc
actcaaactccggttacagtcaccgcttcttcatcaacatcatcgccggttatttatcat
ccatctgtcgtagcaccggttgccgctggttcgagttcggtttcaactgttccatcttcg
tctctgcctccgacgacagcattgctgagttctgaacttgaaaagaagcttacactggag
acggttccggaggcttctgctccgtcgtctcagaaggcgacaaggttccctgaccgtcct
ggtttcggtcaagtaggaaggaagattcgagttcgcgccaatcatttccatgtgcaagtc
gctactaataaagttcttcaccattacgatgtattgattgcacctgagattgcatcgaag
aaagtgtccagggatgttatcaatcagttggtgaaaatgcataaggagtccctattgggg
aataggattcctgcctatgatgggagaaagagtctgtttactgctggtccattaccattt
acgtcgaaggtttttgtgattaacttggttgatgagaacaaaggatcctcttctggttct
gacacgaaaaagcgtgaacgcgagtttaaggttacaattaagttagcttcggaacccgat
ttgaaccatcttgctcagtttctccgtcgtttgcagctggattgtccttatgaaaccata
caagctcttgatattactttgcgagcaactccatctgaaatgtatactgttgcagggagg
tcatttttctctccccgtttgggggcacaggggcctcttggcggtgggacagaatattgg
aaaggctattatcaaagccttaggccaacacagatgggattgtccctcaatattgatgtt
gcttcgagggctttttatgaaccgattcttgtgactgactttatttctaagaattttaag
ttgaatttttcaaggcgactgtccgatcaagatcgtgtcaagatcacgaaagccttgaga
ggtcttaaggtaagattctctcgcggagagatcataaggagttacaaggtgaccggtgtc
tcaaaagagccactcagagacctaacgttcatgcttgatgacaaagtaactcggaaaaaa
gttgttgatcatttccatgagagatacggtactgtgttaaagcatccacttcttcccgct
ctccaagccggaagtgacacgaggcctatgtattttccaatggagctttgtcaaattgag
cctggacaaaggtactccaaaagattgaacgaagagcaagtaactaatcttttaagggcc
aactgtcagcgtccccatcagagggaaagtgatattaaaaatatcgtgaagcagcaccgt
ttcaacatagacgaagttgtgtgtgagtttggtatcaatgtaagggaggaacttgctttg
gttgatgcccgtgttttgcctcccccaacgctcaaatatggtggagagtcaaaaattaac
cccatgatgggacaatggaatatgatgaaacataaagtggttaatggtggcaaggtggaa
ttttggagttgccttagcttttctagattgaacccaactcaattttgtgcggagttggct
attatctgtcaagccaagggaatacttttcaaccgagatcctttggtacctatagcccca
gccaattcaaatgaaattgagaaagagcttgaggaattcgacaagtactgcaaggcaaaa
cttaatagtacaaaccagaaaggaaggctgcaactgttgatagttattttgcctgatttc
aaggggaggttttatgaccaaataaagcgtgaatgtgaaactaaattaggaattgtgact
caatgttgcgagccaaggaaagtggcaaagatgaataaaatgtatctggagaatttggct
ttaaagattaatgttaaggttggtggtcgtaacaccgtgctgaatgatgcagttatatat
aatattcccctagtaactgataaaccaactataatatttggagcggatgtaacacaccct
catccaggagaagactcaagtccttctatagctgcagtggtggcatccatggattggcct
tgcgtcacaaagtacagggggatggtttcttcccagattcatcgggaagaaattattcaa
gatctttatacagaaacaaaacatcctcaaaagggaactgtgcctggtggaatgataagg
gagttactcctggctttctatagatcaaataataaacggaagcctgagaggatcatattt
tacagagatggagtaagtgaagggcagtttagtcaggttttgctgtatgagatggatgca
atttggaaggcttgtgcctcatttgaagaggggtatctgccaaaagttacatttgtggtt
gtccaaaagagacatcacacccgattctttccggtcagttctgatcagacagataaaagt
ggaaacataatgccaggaactgtggtagatacaaccatttgccatcccagggaatttgat
ttttatctgaacagccatgctgggattcaagggactagtcgaccaactcattatcatgtg
ttgtttgatgaaaataactttagtgcagatcagttacagggtttaaccaataacttatgt
tacacttatgcaaggtgtactcgatcggtgtcaatagttcctcctgcttattatgcccac
ttgttagcttcccgagctcgctgctacattagtgatgtggaaaatcatgattccggttct
gcaagtggtaataggagtgcccccaactctgttgcaacactgccctcaattatgggaaac
gttttagaagttatgttttactgttga
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