Medicago truncatula (barrel medic): 25492506
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Entry
25492506 CDS
T01716
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
25492506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25492506
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25492506
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
U-box type E3
25492506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
zf-C3HC4_4
Arm_2
zf-Nse
KAP
MCAfunc
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
25492506
NCBI-ProteinID:
XP_013456112
UniProt:
A0A072UM21
LinkDB
All DBs
Position
4:complement(31825592..31830660)
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AA seq
662 aa
AA seq
DB search
MEGEKVNVVIDLVNEIANISDFRPMVKKQYCNLARRLKLLIPLFEEIRDMKDSIPNDTSK
ALVLFKDALDSAKELLRFGCEGSKIYMVLERDRIMNNFYEVTARLEQSLDGISYDKLDIS
DEVKEQVELVLTQFRRAKGRVDEPDAKLYEDMSFLYNNSSDAAIDPAVLSQLADKLQLMG
IADLTQESLALHEMVAVSGGDPGARIEKMSMLLKKIKDHVQIENLVKDDTKTAKGVSAGF
YELGENDANHQAPAIPSDFKCPISLELMMDPVIVSTGQTYERSCIEKWLQDGHGTCPKTQ
QSLTSTVLTPNYVLRSLIEQWCEANGIEPPKRPSTSEPSKSASACTPAERSKIESLIQKL
TSGGPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLNL
SIYESNKGSIVSSGAVPGIVHVLKRGSMEARENAAATLFSLSVIDENKVTIGSSGAISPL
VTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPSGGMVDEALAIL
AILASHPEGKAAIGAAEAVPVLVKFIGNGSPRNKENAAAVLVHLCSGDRQYIAQAQELGV
MAPLLELAQNGTDRGKRKATQLIERMSRIREQEQHEVPTQTELQAQNDDIHPPLIINLDI
DT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaaaaagtaaacgtggtgattgatttggtgaacgagatagcgaacatctca
gacttcagacctatggtgaaaaagcaatattgtaacttagcacgaaggttgaagctgttg
attcctttgtttgaggaaattagagatatgaaagattcgattccgaatgatacttcaaaa
gcgttggttttgtttaaagatgctcttgattcagctaaggaacttctcagatttggttgt
gaaggaagcaagatttatatggtccttgagagggaccggatcatgaataatttctatgag
gtgacagctcggttggaacaatcactggatggaatttcctatgataaacttgacatatca
gatgaagttaaagagcaggttgaactggttcttactcagttcagaagagccaaagggaga
gttgatgaaccggatgccaagttgtatgaagatatgtcatttctttacaacaatagcagt
gatgcagctatagatccagctgtgctaagtcaattagcagacaaattgcaattgatggga
atagccgatcttacacaagaatcactcgctttgcatgagatggtggcagtaagtggtggg
gatccaggggcgcgcattgagaagatgtcaatgttattgaagaagataaaggatcacgtg
caaatagaaaacctagtgaaggatgataccaaaacagcaaaaggcgtttctgcaggattt
tacgaactaggggaaaatgacgcgaatcatcaagcccctgctattcccagtgattttaaa
tgtccgatttccttggaattgatgatggatcctgtcattgtttcaacaggacagacttat
gagcgttcttgtattgagaagtggttgcaagacgggcatgggacgtgcccaaaaacacag
cagagtcttaccagtactgttctcacacccaactatgtcttacgaagcctgatagaacaa
tggtgtgaagccaatggcatagagccaccaaaacgacccagcacttctgagccgagtaaa
tcagcatcagcctgcaccccagctgagcgaagtaagattgaaagtcttatccaaaagctc
acatccggaggtcccgaagaccagagatcagctgccggagagatccggcttctagcaaaa
cgcaatgcagataaccgtgtagctattgctgaagctggtgcaatccctctccttgttggt
ctcctctccgtgccagactctcgaactcaagagcatgctgttacagcacttctgaatctc
tcaatatatgagagtaacaaaggaagcattgtttcttccggagcagttccaggcatagtt
catgtgctgaaaaggggaagcatggaagctcgggaaaacgcagcagcaacacttttcagc
ctttcagttatcgatgaaaataaggttacaattggttcttcaggagcgatatcgccgctg
gtgacactgctgagtgagggtacccaaaggggtaagaaagatgctgcaactgcactcttc
aatttgtgcatttatcagggaaacaagggaaaagcagtgagggccggtgttattccgacg
ctgatgcgattgctgacagaacctagcgggggaatggtggatgaagcattggcaattttg
gcaattttggctagtcatcctgaagggaaagctgccattggtgctgcagaggcagtgccg
gttttggtaaagtttatcgggaatggatccccaaggaacaaagagaacgcagccgcggtt
ttagtgcacctttgttctggagatcgacaatatatagcacaggcacaagagctaggggtg
atggctccattgttggaattggctcaaaatggcacggacagaggcaaaagaaaggcaaca
caattgatagagcgtatgagcaggatccgtgagcaggagcagcatgaagttccgacacaa
actgaacttcaagctcagaacgatgatatccatccacctttgatcattaacctcgatatt
gacacctaa
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