Medicago truncatula (barrel medic): 25492825
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Entry
25492825 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25492825
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25492825
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
25492825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
Zn_ribbon_6
zf-Nse
zf-RING_4
TRAF3_RING
zf-RING_10
zf-ANAPC11
Prok-RING_4
RING_XB3-XBAT31
Sina_RING
TerY_C
Clr2
fn3_5
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
25492825
NCBI-ProteinID:
XP_013456525
UniProt:
B7FGG8
LinkDB
All DBs
Position
4:36246932..36251155
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AA seq
247 aa
AA seq
DB search
MSTRTSRVPVGIRTNRRRKAAIDLDLNRVPAAEHSTARNPIAENPSGENREQERRLTQLG
PQEVEVQANQQQEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSRRN
RGRTVVDVDLVMFFAEEQIRLSNNNRNKRRRESPKRSIFNCDLYINLDASSSNTMESVKK
PPEPPKEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRKKITVKELIR
VFLPTTA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcggacaagcagggtgcctgttggtatcagaactaaccggcggaggaaggca
gctattgatcttgaccttaaccgagtaccggctgctgaacattcaactgctcggaatccg
attgctgagaatccatctggtgagaatcgtgagcaggagaggcgtttgactcagttgggg
cctcaagaagttgaagttcaagctaaccagcaacaggaagtagaagttcaagctaatcag
ctacagctagttgcgcaacctgaacctactttgattgatgtggaagccattgatgacgac
gatgttgttttatcttccccgagggcttttgctgaggccaaaaacaattctcgaagaaat
cgtggaaggactgtagttgatgtcgatttagtcatgttttttgcagaagagcagattagg
ttaagcaacaataatcgcaacaaacgcagacgagaatctccaaaacgatcaattttcaac
tgtgatctttatataaatttggacgccagcagcagcaatacgatggaaagtgtcaaaaag
ccacctgagcctccaaaggaacctgtcttcacctgtcctatatgcatgggccctatggtt
gaagaaatgtcaacaaggtgtggtcatattttttgcaagtcgtgtatcaaggctgctata
agtgctcaggcaaaatgtcccacctgtagaaaaaagattactgtgaaagagcttataagg
gtgtttctgccaacaactgcttga
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