Medicago truncatula (barrel medic): 25492833
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Entry
25492833 CDS
T01716
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
25492833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25492833
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
25492833
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
25492833
Prokaryotic type
25492833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
25492833
NCBI-ProteinID:
XP_013456534
UniProt:
A0A072UXG8
LinkDB
All DBs
Position
4:36278354..36284024
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AA seq
302 aa
AA seq
DB search
MASASSKTLIDIFGRASKRLKPTLCKSEDNINSSSTLTVDQKSRIEHNKNLALSRKNRKI
CIERVSKHKESLASGCVKLEELLVEESWLEALPGEFQKDYAVNLSKFVETEICKDDYVYP
PAHLIFNALNTTPFQSAKVVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKQD
LGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHSKKGWEQFTDTVIKTISQKKEGVV
FLLWGKSAQEKLRLIDATKHHILKAAHPSGLSANRGFFGCRHFSQTNKYLEQMGIGPIDW
QL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcatcctccaaaaccctaatcgacattttcggtcgagcttcaaagcgcttg
aaacccactctctgcaaatccgaagataacatcaattcctcctccaccctcaccgtcgac
caaaaatcacgaatcgaacacaacaaaaatctcgctttgtccagaaagaaccgcaaaatc
tgcatcgaaagggtttccaaacacaaagaatctttagcttcgggttgtgtgaaactagag
gagttgctagtcgaggaatcgtggttggaagctttacctggtgaatttcagaaagattat
gctgttaatctctctaagttcgtcgaaactgagatttgtaaggatgattatgtatatcct
cctgcgcatttgattttcaatgctcttaatactaccccttttcaatctgctaaggttgtg
atccttggccaggacccttatcatggacctggtcaagcaatggggctttcattctcggtt
cctgaaggagtcaaagttccatctagtttggttaatatatttaaggagcttaagcaagac
cttggttgttcgattccgtctcatggtaatcttgaaaaatgggctgtgcagggcgttctc
ttactgaatgctgttctcacagtcaggaagcaccaagcaaattctcattcaaaaaaaggc
tgggaacaatttactgatactgttatcaagacaatctcacagaagaaggaaggagttgtg
tttctgctgtggggaaagtctgctcaggagaaacttaggttaattgatgcaaccaaacat
cacattctaaaagctgcacatccttccggtttgtctgcgaatagaggcttctttggttgc
aggcacttctctcagactaacaaatatctggagcaaatgggcattggtcccatagattgg
caactataa
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