Medicago truncatula (barrel medic): 25492895
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Entry
25492895 CDS
T01716
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
25492895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
25492895
03036 Chromosome and associated proteins [BR:
mtr03036
]
25492895
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
25492895
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
25492895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
25492895
NCBI-ProteinID:
XP_013456629
UniProt:
A0A072UXQ9
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All DBs
Position
4:37841564..37846111
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AA seq
342 aa
AA seq
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MGTQPHQSSVDEEDEELMGCGTTISGQSGSTSRSAGLPSSRSEQTTGTAAGDNAALKLNH
LDIQDDDAASQAVVATKKKKRRAVGGDKNGRGLRQFSMKVCEKVESKGRTTYNEVADELV
AEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLSDI
EELKTQRLGLRSRIERKAAYLQELEQQFVGLQNLIQRNEQLYSSGNPPSGGVSLPFILVQ
TRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMDFGGGERPQSDNVTHNIADGG
EGSSMSGMYQSQVPQSVSNMLVRPPTSPPLPGILKARVKQEH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcagccgcatcaatcgtctgtggacgaagaggatgaggaattgatgggttgt
ggaactacgatttcgggacaatcaggctcaaccagcaggagtgccgggttaccgtctagc
cggagtgagcagaccacggggacagccgccggtgataacgctgctctcaaattgaatcat
cttgatatacaggatgatgatgctgcatcacaggcagtagttgctaccaagaagaaaaag
cgacgggctgttggaggtgataagaatggaagagggctccggcaatttagtatgaaagtg
tgtgagaaggtagaaagtaaaggaagaacaacttacaatgaggtggcagatgaacttgtg
gctgaattttctgatccaagcaatggtggtttgtcccctgatcagcaacaatacgatgag
aaaaacatccgtcgaagggtctatgatgctctgaatgttcttatggctatggatattatt
tccaaggataaaaaagaaatacaatggaagggtcttcctcgtaccagtctgagtgatatt
gaagaactaaagacacagcgtcttgggctcaggagtagaattgaaaggaaagcagcctat
ctgcaggagcttgagcagcaatttgtaggtcttcagaaccttatccaacgaaatgaacaa
ttatatagctcaggaaatcctcccagtggaggtgtatctttaccttttattctggttcag
acacgtcctcatgcaactgttgaagtggaaatatcagaagacatgcagcttgttcatttt
gatttcaatagttctcctttcgagctgcatgacgacaattatgttctcaaggcaatggat
tttggtgggggtgagagaccgcagagtgacaatgttacacacaatattgcggatggaggg
gaaggttctagcatgtcaggcatgtatcaatcacaggttcctcagtcagtttcaaacatg
ttagttaggcctccgacatcacctccactccctggaatattaaaggcaagagttaagcaa
gagcattga
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