Medicago truncatula (barrel medic): 25492998
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Entry
25492998 CDS
T01716
Name
(RefSeq) SEC12-like protein 2
KO
K14003
prolactin regulatory element-binding protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
25492998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25492998
Membrane trafficking [BR:
mtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
25492998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
CFAP43_N
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
25492998
NCBI-ProteinID:
XP_013456820
UniProt:
A0A072UND0
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All DBs
Position
4:40927101..40934538
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AA seq
411 aa
AA seq
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MVKKHVPDPPNLKKYGVPLYSVAWIPQSILKSLQNVTTDDDHSSDDAADHKSSPETEAVD
AGKYLVFAGGGGDSRSGIPNSVLLAHFDVVSDSLSDPPVFKLGTNSELPYRMALHPNGEG
IICAMEKPKCCRWFDWDQNEDAEIHKLGLKVSEKLLTQLDNVGQQLALAFNNDGTTLAAG
GEDGSLRVFKWPSMENILNESNAHSTVKDLHFSSDGKLIVSLGGGGPCRVWDVSSAIVLA
TLANENRENFSSCRFSQTNDGTQVLYIAARTDKGFGSIVTWNTQTWERISSKHILRDPIC
AFNVSADGKFLACGTPEGDIVIVNSTNMQIQTMIKKAHLGVVTALAFSPDSRALASVSMD
SSARVTIIEEKKNGGGLSLWIAIFIFLLAIAASFLKVEGIEKLKLQYYNQL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaaacacgtcccagaccctccgaacctgaagaaatacggcgttcctttatac
tccgttgcttggatcccacaatccattctcaaatcgctccaaaacgtaaccaccgatgat
gatcattcctccgacgacgctgccgatcataaatcttcgccggagacggaagcagttgac
gccggaaagtacctcgtgtttgccggtggcggtggagatagccgcagcggtattcctaat
tctgtgttgctcgcgcattttgatgttgtatcggattctctctctgatccaccggtgttt
aagctaggaactaattccgagttgccttatagaatggcacttcaccccaatggagaaggc
attatttgtgcaatggaaaagccaaagtgttgcagatggtttgactgggatcaaaacgag
gatgctgaaattcacaagttgggtctgaaggtttcagagaagctgctcacccagttggat
aatgttggacaacaattagcattggcattcaacaacgatggtactacactggctgctggt
ggagaggatggcagtctaagggttttcaagtggcctagcatggaaaatattctcaacgag
tccaatgctcattctactgtgaaggacttgcattttagttctgatggcaagttgattgtc
tctttgggaggtggcggcccctgcagggtttgggatgtttcttcagcaatcgtcttagct
actctagcaaatgaaaatcgtgaaaattttagctcttgcagattttctcaaacaaatgat
gggactcaggtcctatatattgctgccagaacagataaaggtttcggaagcattgtgacc
tggaatacacaaacatgggaaaggattagttcaaagcatattttgcgcgatccaatatgt
gcattcaatgtctcagctgatggaaagtttctggcatgcggaacacctgaaggagacatt
gtaattgtaaattcaacaaatatgcagattcagacaatgataaaaaaggctcaccttggt
gtagtaactgctttagcattttcccctgattcaagggcgttggcttctgtatccatggat
tcaagtgcgagggtaacaataattgaagagaagaaaaatggaggaggactgagcttgtgg
attgcaatatttatcttcctacttgcaatagctgcttccttcctgaaggttgaaggaatt
gaaaagttaaagcttcaatattacaatcaattgtag
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