Medicago truncatula (barrel medic): 25493137
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Entry
25493137 CDS
T01716
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25493137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25493137
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
25493137
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
25493137
NCBI-ProteinID:
XP_039688706
LinkDB
All DBs
Position
4:43204570..43209088
Genome browser
AA seq
1209 aa
AA seq
DB search
MAGVSSRTRSKNVPLFGSLLLGGSSKRRKSDEEDKGLDYVSRSKKRKMNEEPFVVPADAE
VVSIDDDEYEDVGQEGSEHSDDKMSKDGKFVDENCEREQDNPVSISSDEYGESDEEHFVD
SDADNEEEEEEEEKKEDDAVKEGVKSDESGGIGRFSDKGEKVIIDLDDSEESEEEDDSDE
SEENDSSDEDFAEEEEVVEKEKKEGYRKDFNVVEELVRKVKSQKRGISEGNDEEVNVENC
SSSDNDDEEMVREGKDKKSGISERNNEKVNVENSPSYDNDEEMVREVKRKKSGIFKRKYE
KVENENVPSSTNIDELEHADHASVSSCIIEKKGSSSSKLNGVSETLKPMSVDVGVNAKSK
AKSKENVGDSDRGKDQFVKGLDVGGVSSVHRKQEKMNESDKQKTMENKRRDYKGRANICN
GEKKESIDTNGLNQSVKSTHFTRKELRSLELLVKCYWERKNTINNDSIVLEDNDDGVGQQ
DTWPPPVSVETPRERIWSLKKVEKVEKTKEEEEEEVLWDEFDTARRESDAESMIGNLGEN
GGPSFRCEHDSFLDEEIGLFCKLCHEVVTEIKYISPPVIDRFPGEGSGKKASFDGVNVSH
VDGSQLNVSDNDSETNFSRNEGTVWDLIPGVKQKLYPHQQEGFEFIWKNMAGHTELQKLK
NADPSSEGGCIISHAPGTGKTRLTIVFLKAYLKAFPKCLPIIVAPASILLTWEDEFKKLD
IGVPFHNLNNPELSGKEHPDAVETFDMSNARHNIHETRMAKLISWFKEPSILGISYNLFG
KKCQDKRKHENVNEREGNCDMRKVLLNSPGLLVLDEGHTPRNQRSHIWKVFLKLQTQKRI
ILSGTPFQNNFWELYSTLSLVKPSFPNTIPPELKSFCQNQGLKSSKKWNWEPALLNKTRD
PSDDQIKKFKLLMDPFVHVHKGAILENKLPGLRDSLVTLKAGSLQNEILKSIKRSQNTIF
NFERKVALTSVHPSLFLECALSEEEKSALDKDQLEKLRLNPHEGVKTKFLFEFVRLCDAF
HEKVLVFSQFHAPLQLIKDQLNSAFKWSEGKEVLVMSGEDPPKVKQSVIHSFNVENCQAK
VLLASTKACSEGISLVGASRVVLLDVVWNPSVERQAISRAYRIGQKRVVYTYHLLAEGTT
EEEKYGKQAEKDRLSELVFSAKNAANNGDKSKSSAVNFEDRVLDEMTKHEKLKGIFVKCV
VLRKERDVV
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtttctagcagaactcgtagcaagaatgttccgttgtttggttctctttta
cttggtggttcatcaaaacggagaaagagtgatgaagaagataaggggttggactatgtt
tctcgttctaaaaaaaggaagatgaacgaagaaccttttgttgttcctgcagatgctgag
gtagtttccatcgatgatgatgaatatgaagatgttggtcaagaaggttcagagcatagt
gatgacaagatgtctaaagatggaaagtttgttgatgaaaattgtgagagggaacaagat
aacccggtttcgataagttcagatgagtatggtgaaagtgatgaagaacactttgttgat
tctgatgctgataatgaagaagaagaggaagaagaagaaaaaaaagaagatgatgctgtt
aaagagggagtaaaaagtgatgaaagtgggggaattggtaggttttctgataaaggtgaa
aaggttataattgatttggatgattctgaagagagtgaggaggaggatgattctgatgag
agtgaagaaaatgactctagtgatgaagattttgcagaggaggaggaggtggtggagaag
gagaaaaaagagggttacagaaaagacttcaatgtggtggaggaattagtaagaaaggtg
aagagtcaaaaaaggggaatttctgagggtaatgatgaggaagtaaatgttgagaattgt
tcatcttctgataatgatgatgaggagatggtgagagaggggaaggataaaaagagtgga
atttctgagaggaataatgagaaagtaaatgttgagaatagtccatcttatgataatgat
gaagaaatggtgagagaggtgaagcgtaaaaaaagtggaatttttaagaggaaatacgag
aaggtagagaatgagaatgttccatcttccacaaatattgatgagttggagcatgcagat
catgctagtgtttcctcctgtatcattgagaagaagggtagttcttcttctaaactgaat
ggagtatcagagacactgaaaccaatgagtgtggatgttggagtgaatgccaagtcaaaa
gccaaatccaaagaaaatgttggtgattctgatcgaggaaaagatcaatttgttaaaggc
ttagatgttggaggagtttcttcagttcatagaaagcaagaaaagatgaatgaatcagat
aaacagaaaacaatggagaacaaaagaagggattataaaggtagagctaacatctgtaat
ggtgagaagaaggaatctattgataccaatggtttgaatcaaagcgtcaaaagcacacat
tttacgcggaaggagttgcgttcactcgaactccttgttaaatgctattgggaaagaaag
aataccattaacaatgattcaattgtgttagaggataacgacgatggtgttggtcagcaa
gatacatggccaccaccagtctctgtggagacacctcgtgaacggatatggagccttaaa
aaggtggaaaaagtagaaaagaccaaggaggaagaggaggaggaagtgttatgggatgaa
tttgatacagcccgtagagaatctgacgctgaatccatgattggaaatttaggagaaaac
ggaggtccatcgttccgctgtgaacatgatagttttctcgatgaagagattggtctattt
tgcaaattgtgtcatgaggttgttactgagatcaaatatatctcaccacctgtgattgat
agatttcccggtgaaggttcaggaaaaaaagcatcatttgatggagtaaatgtttcacat
gttgatggatctcagttaaatgtttctgataatgattcggagactaatttctctcgcaat
gaaggcacagtttgggacctaattcctggtgtgaaacaaaaattatatcctcatcaacaa
gaaggctttgaattcatttggaaaaacatggcaggacacactgagcttcaaaagttaaag
aatgccgatccttccagcgaaggtggctgtattatttctcatgctcctggaaccggaaag
acaaggctgaccatagtgtttctcaaggcatatttgaaagcctttcccaaatgcttgccg
attattgttgctcctgctagtatactactaacttgggaggatgaattcaagaaattggac
atcggagttccatttcacaatttaaacaatcccgagttatctggtaaagagcatcctgat
gcggttgaaacatttgatatgtctaatgcacggcataatattcatgaaacgcggatggca
aaactgatttcgtggttcaaagaaccaagcattcttggaatcagctataatttgtttggg
aaaaaatgccaagataagagaaagcatgaaaatgtgaatgagagagaaggaaactgtgat
atgcgaaaggttctacttaattctcctgggttgttagttctagacgaaggacacacacca
agaaatcaaagaagtcatatttggaaggtgtttttgaagcttcaaacacagaagcgtatt
atcctttccggaactccattccagaacaatttctgggagctttacagcaccttaagctta
gtgaagccttcttttcctaacacaataccgcctgagctaaaaagtttttgccaaaatcag
ggacttaaatcatctaaaaaatggaattgggaaccagcgttgctcaacaaaacaagagac
ccttctgatgatcagatcaagaagtttaaattgctaatggatccctttgttcatgtgcac
aaaggcgcaatccttgaaaataagcttcctgggttaagggacagtttggtgactttgaag
gctggtagtttgcagaatgaaattctgaagagcattaaacgttctcagaacacaatattt
aactttgaacgtaaggtagcgttgacatctgtccatccatcgcttttccttgaatgtgct
ctttcagaagaagaaaaatctgctctcgacaaggatcagctggaaaagcttagactgaac
ccacatgaaggtgtcaaaacaaaatttttgttcgagtttgttcggctatgtgatgctttt
cacgagaaagttcttgtgttcagccaattccatgctcctttacaattaataaaagaccaa
ttaaactcagcttttaaatggtctgagggaaaggaagtgctggtcatgtctggcgaggat
cctccaaaggtcaagcaatccgtaatccatagcttcaacgttgaaaattgccaagcaaaa
gttttacttgcatctacaaaagcttgttctgagggaattagcttagttggagcttcaagg
gttgtacttctggatgttgtatggaatccttcggtcgaaagacaagctatcagccgagcg
tataggattggtcagaagagagtagtatacacataccatctgctcgctgaagggactact
gaggaagaaaaatatggtaaacaggccgaaaaagaccggttatctgagcttgttttttca
gcaaaaaatgctgccaataatggtgataagtccaagagctctgctgtgaacttcgaagat
agagttcttgatgagatgactaaacacgaaaagctcaaaggcatatttgttaagtgcgta
gtactgaggaaggagcgagatgtggtctga
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