Medicago truncatula (barrel medic): 25493191
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Entry
25493191 CDS
T01716
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
25493191
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25493191
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
25493191
Protein phosphatases and associated proteins [BR:
mtr01009
]
HAD phosphatases
Fcp/Scp phosphatases
25493191
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
25493191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
25493191
NCBI-ProteinID:
XP_013457069
UniProt:
A0A072UZ11
LinkDB
All DBs
Position
4:complement(43559671..43569396)
Genome browser
AA seq
958 aa
AA seq
DB search
MYKSVVYQGEVMLGEVDIYPEVNNNINNKNKNFDVKEIRITQFSQPSERCSPLAVLHTIT
TVCFKMESKTQHQNQLLHLHSLCIRENKTAVMPLYGEELHLVAMHSRNDDRPCFWGFIVA
TGLYNSSVVLLNLRCLGIVFDLDETLVVANTMRSFEDRIDALQRKVNSEVDPQRISGMQA
EIKRYQEDKSILKQYAENDQVVDNGKVIKVQSELVPALSDSHQPIVRPLIRLHEKNIILT
RINPQIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVFVCTMAERDYALEMWRLLDPDSNL
INAKELLGRIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRVHVVPAFA
PYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPPAPDV
SNYLVSEDDGSASYGNRDPFLFDGMADAEVERKLKDAISATSAIPMTTAKLDPRLTSSLQ
YTMVSPGSVPPPAPHASMIQLPHTQFLQPATPVKPMVQVAPLESSLHSSPAREEGEVGES
ELDPDTRRRLLILQHGQDIRDHTSSEPPFPVRHPNPVQVSTRAPSRGGWFPVEEEIGSQP
PNRVLPKEILVDSGPSRMEKHRPHQPSFFSKVDGSISSDRALHESHQRLPKEIYHRDDRS
RVNHMLPSYHSLSGDDILFGRSSSSHRDLDSESGNSVLHAETPAAVLQEIALKCGTKVEY
TSSLVASRELQFSVEAWFSGKKVGQGIGRTRMEARYKAAEDSIKHLADIYLSRAKDEPGS
AYGDVSGFPNANDNGYVGNVSSLGNHPLPKEEAVSFSAASDLSRVLDPRLEVSKRSTGSV
SALKELCMMEGLGVNFLSVPAPLSTNSVQKDEVYAQVEIDGQVYGKGTGLTWDEAKMQAA
EKALGSLRPMHGHSIQRRQSSPRPFQGFSNKRLKQEHPRTLQRFASSGRYPRNAPAIP
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtgtatcaaggggaggtgatgttgggtgaggtagatatataccca
gaagtgaacaacaacatcaacaacaagaacaagaattttgatgtgaaggaaatcagaata
actcagttttctcaacctagtgagaggtgttcaccacttgctgttcttcatactattact
actgtttgcttcaaaatggagtcaaagacacagcaccagaatcagctcttacacttgcac
tccttgtgtatcagagagaacaagacagctgttatgccgctgtatggggaagaattacat
ttggttgcaatgcattcgcggaatgacgacagaccatgtttctggggatttattgttgcc
acaggactttataattcatccgtcgtgttgttaaatctcagatgtttgggtatagtgttt
gatctggatgaaacccttgttgtagcaaatacaatgcgctcgttcgaggatagaattgat
gcactccagagaaaagtaaactctgaggtagatccacaacgaatttctggcatgcaggcg
gagatcaagcgctaccaagaggacaagagtatattgaagcagtatgctgaaaatgatcag
gtagttgataacggaaaagtgataaaagttcaatctgagcttgttccagcattatctgac
agtcatcagcccatagttcgaccactgatacggttgcatgaaaaaaacattattttgaca
cgcatcaatccgcagattcgtgatacaagtgttcttgtgaggttgagacctgcatgggaa
gatcttcggagctacctgattgcaagagggcgcaagcgttttgaggtttttgtttgcaca
atggctgaaagggactatgcgctagaaatgtggagacttcttgatccagattcaaatttg
ataaatgcgaaagaactattgggtcgcattgtatgtgttaagtccggtttgaaaaagtcc
ttgttcaatgtcttccaagatggctcatgccatccaaagatggcgttagtaattgacgat
cgcttgaaagtgtgggatgagaaagatcaacctcgggtacatgtcgttcctgcatttgct
ccatactatgctcctcaagctgaggcaagcaatactatccctgtcttgtgcgttgcaaga
aatgttgcttgcaatgttaggggtggcttctttaaggattttgatgatggtcttctacaa
aagattcctcaaattgcctatgaagatgatattaaagatatacctcctgctcctgacgtg
agcaattatctagtttcagaggacgatggatctgcttcctatggaaatagagatccgttt
ttatttgatggcatggcagatgctgaggtagaaagaaaattgaaggatgcaatatcagca
acttcagctattcctatgacaactgcgaagttagatcccaggctcacttcttctcttcag
tatacaatggtatctcctggttcagttccaccacctgcaccacacgcatctatgatacaa
ttgcctcacacacagttccttcaacctgctacaccagtaaagccaatggttcaagttgcc
cctttagaatcaagcttgcatagttctcctgctagagaagaaggggaagtaggtgaatca
gaattagacccagatacaaggcgaaggcttctcatattgcaacatggacaagatattagg
gatcatacatctagtgagcctccattccccgttagacaccccaatcctgtacaagtttcc
actcgtgcaccatcacgtgggggatggtttcctgtagaagaggagattggttcacaacca
ccgaacagagtactacctaaagaaattcttgtagattctggtccatcacgtatggagaag
caccggcctcatcaaccatcctttttctctaaggttgatggctctatttcatctgataga
gctctccatgagagccaccaaagattgccaaaggagatttaccatagagatgatcggtca
agagtaaaccatatgctccctagttatcattcgttatctggtgatgacatcctctttggt
aggtcatcttctagccacagggatcttgactctgaatctggtaattctgtattgcatgca
gaaacaccagctgcagtattacaggaaattgcactgaagtgtggaactaaggtggaatat
acatcatctttggttgccagcagagagctgcagttctccgtcgaggcgtggttttctggg
aaaaaagttggccaaggaattggcagaactagaatggaagcgcgatataaggctgctgag
gattctattaaacatttggctgatatatatttatcacgtgctaaggatgagcctggttcc
gcatatggtgatgtgagtggatttcctaatgcaaatgacaacggttatgtgggtaatgtt
agttctcttggtaatcaccccctgcctaaagaggaggcggtctcattttcagctgcatca
gatctatcaagggttttggatcctaggttggaagtctccaagagatcaacgggttcagtc
tctgccctcaaagaattgtgcatgatggagggtcttggtgtcaattttctatcagtgcct
gctccactttcaacaaattcagttcagaaagatgaagtatatgcacaggttgagatagat
ggccaggtctatggtaaagggaccggattaacatgggacgaggctaaaatgcaggctgct
gagaaggcacttggaagtctaagaccaatgcatggccacagcattcagagacggcagagt
tctcccaggccatttcagggattctcgaataaacgtttgaagcaagaacatccacgaact
ctgcagcgattcgcatcttctggtagatatcctaggaatgctccagcaatcccgtga
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