Medicago truncatula (barrel medic): 25493473
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Entry
25493473 CDS
T01716
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 isoform X2
KO
K13717
OTU domain-containing protein 3 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
25493473
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25493473
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
25493473
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C85
25493473
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
25493473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OTU
SEC-C
OTU_Vertnin
Peptidase_C65
ARHGEF5_35
UBA_HYPK
DMA
UBA_4
Motif
Other DBs
NCBI-GeneID:
25493473
NCBI-ProteinID:
XP_013457430
UniProt:
A0A072UQ38
LinkDB
All DBs
Position
4:47085961..47091618
Genome browser
AA seq
384 aa
AA seq
DB search
MAKPKQHKKPPQKKPQNPQNKKQGKQDDPSQFRSQVDALGLRIVEVTADGNCFFRALADQ
LEGNEEEHQKYRSMVVKHILDNREMFEPFIEDEVPFDDYCQTMENDGTWAGNMELQAASL
VTHSNICIHRNMFPRWYIRNFDDSQVHMVHLSYHDGEHYNSVRLKDDPCDGPARSIVIKA
DADLSAPSHLPKDRASKPYAQAGMKTFQPGLVKVVMAGSGCENREKVEQILKQVNGDVDA
AIEFLIAEQGAEECSSNSECIPSQASTTGCDENESHEKHKENMVEESSHSTNDEVSNSST
KANDNITLQQNDKIPRNRVCPCGSKKKYKACCGTSSGKQSAKFLVNQAADSRRNKKDTKK
GISAKAGVSCEYDSVTRDMGALCI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacccaagcaacacaagaaaccaccacagaagaagccacaaaacccacaaaac
aagaagcagggaaaacaggatgatccttctcaatttcggagtcaggtggatgctctaggc
cttcgcattgtcgaagtgacagcagacggtaattgtttcttcagagcccttgctgatcag
ttggaaggtaatgaggaggaacatcaaaagtaccgcagcatggtggtgaaacacatattg
gacaaccgggagatgtttgagccctttattgaagatgaagtcccatttgatgattattgc
cagaccatggaaaatgatggtacttgggctggaaatatggaattgcaggcagcttctctt
gtaacacatagtaacatatgcatccatcggaacatgtttcctcggtggtacataagaaat
ttcgatgattctcaagttcacatggtccatttgtcttatcatgatggggagcattataat
agtgtgcggttaaaggatgatccttgcgatggacctgcaaggtcaattgtaattaaggcg
gatgccgatctttcagcgccatctcatctaccgaaagatagggccagcaaaccgtatgct
caagctggtatgaaaacttttcagcccgggttagtaaaggtggttatggctggaagtgga
tgtgaaaacagagaaaaagtggaacagattctaaagcaggtaaatggagatgttgatgct
gcaatagagtttctaatagcagaacaaggagcagaagaatgctcttcaaattctgaatgc
attcctagtcaggctagtactactggttgcgatgaaaatgagagtcatgagaagcacaaa
gaaaacatggtagaggagagcagtcacagcactaatgatgaagtgagcaacagctccaca
aaagccaatgataatatcacattgcaacaaaatgacaagattccaagaaacagagtctgc
ccgtgcggttcaaaaaagaaatacaaagcttgttgtggaacttcgtcggggaaacaatct
gctaagtttctagttaaccaagccgctgactccagaaggaacaaaaaagatacgaagaaa
gggatttctgcaaaagctggagtatcttgtgaatatgactcagtgacacgtgatatgggt
gcactttgtatctaa
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