Medicago truncatula (barrel medic): 25493517
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Entry
25493517 CDS
T01716
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00900
Terpenoid backbone biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
25493517
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mtr01006
]
25493517
Enzymes [BR:
mtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
25493517
Prenyltransferases [BR:
mtr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
25493517
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
BAG
Motif
Other DBs
NCBI-GeneID:
25493517
NCBI-ProteinID:
XP_013457480
UniProt:
A0A072UQ86
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All DBs
Position
4:47528555..47537102
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AA seq
417 aa
AA seq
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MLFSRISRNLRGAFNGYRRFLSIGENNRRFLFSHSPADSTEQVMRSLVFSKGMPALYSSR
YHIHHHTSSSLVEDELDPFSLVADELSFIGNKLREMVVAKVPKLASAAEYFFKMGVEGKR
FRPTVLLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIAEITEMIHVASLLHDDVLD
DADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAEVVEHLVTGEIM
QMTTTSDQRCSMEYYMEKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNLGLAFQ
LIDDVLDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPENVNIAL
DYLGKSRGIQKTKELAMKHASLAAEAIDSLPENDNEEVRKSRKALVELTQIVITRTK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcttttttctcgaatttcgagaaacctcagaggtgccttcaatggataccgccggttt
ctctctattggagaaaacaaccgccgctttcttttctcccactcacctgcagattctact
gagcaggttatgagaagtctagttttttcaaagggcatgccagcgttgtatagtagtaga
tatcatattcatcaccacaccagcagctccctagttgaggatgaacttgatccgttttct
ctggtggctgatgaactatcatttattggtaacaagctgcgagaaatggtagttgcaaag
gttcctaagcttgcctctgctgctgagtatttcttcaaaatgggggtggaaggaaaaaga
tttcgtcccacagttttattgttaatgtcaacagcattaaatcttccaattcccaaagca
cctcctccaatggaacttggaggtactacaacaactgacctacgttcaagacaacaacgc
atagctgaaataacagagatgatccatgtggcaagccttcttcatgatgacgtattggac
gatgcagataccagacgtggtattggttcattaaattttgtaatgggaaataagttggca
gtattggccggagattttttgctttcccgggcttgtgttgctctggcctctttaaagaac
accgaggttgtatctttgttagcagaagttgtagaacatcttgtaacgggggagatcatg
caaatgaccacaacatctgatcaacggtgtagcatggagtattatatggaaaagacatac
tacaagactgcatcattaatatcaaacagttgcaaggcaatagccatccttgcagggcaa
acagctgaagttgcagtgcttgcttttgagtatggaaaaaatctgggtttggcgtttcaa
ttgatagacgatgtgcttgattttacaggcacatcagcttcccttggaaagggttcttta
tcagacattcaacatggaatcgttacagctccaatattgtttgcaatggaggagttcccc
cagttgcgtgcaattgtggaagagggctttgaaaaccccgagaacgttaacattgctttg
gattatcttgggaaaagccgaggtatacaaaagacgaaggagctagccatgaagcatgct
agccttgcagcagaagccattgattccttacctgaaaatgacaatgaagaagtaagaaaa
tcaaggaaagcccttgtagaacttactcagatagtcattacaagaacaaaatga
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