Medicago truncatula (barrel medic): 25493638
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Entry
25493638 CDS
T01716
Name
(RefSeq) protein FIZZY-RELATED 1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
25493638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25493638
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
25493638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_RIG_1st
KNTC1_N
Beta-prop_WDR41
Beta-prop_SCAP
Peptidase_M10_C
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
MIOS_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
25493638
NCBI-ProteinID:
XP_013457658
UniProt:
Q9M7I2
LinkDB
All DBs
Position
4:50430169..50435851
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AA seq
475 aa
AA seq
DB search
MDGTGNRNPPPTSTVGDNSPPPEPSPESLRHVSRMINSNHYTSPSRTIYSDRFIPSRSAS
KFALFDINTPTEGRDDSSSAYTTLLRTALFGPDVAGPVTPEKTDSPSMTLPNRNIFRYKT
ETRQSMHSLSPFMDDDFVPGINHSPVKAPRKVPRSPYKVLDAPALQDDFYLNLVDWSSHN
VLAVGLGNCVYLWNACSSKVTKLCDLGVDDCVCSVGWAQRGTHLAVGTNNGKVQIWDAAR
CKKIRSMEGHRLRVGALAWSSSLLSSGGRDKNIYQRDIRTQEDFVSKLSGHKSEVCGLKW
SYDNRELASGGNDNKLFVWNQHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGGGTADRC
IRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTG
HTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTESEIGALSLGRTTIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaccggtaatcgaaatccaccaccgacttccaccgtcggagataattctcca
ccgccggagccatcaccggagagtctccgccatgtaagccgtatgatcaacagcaaccat
tacacctcaccttctcgaacaatctactccgataggttcattccgagtagatctgcttcg
aaattcgctttgtttgatatcaatactccgacggaaggacgcgatgatagttccagcgct
tatacgactcttcttagaacggcgttgtttggaccggatgttgcaggtccggttacgccg
gagaaaaccgactcgccgtcgatgacattgccgaataggaatatttttaggtataagacg
gagacgagacagtccatgcactcgctttcgccgtttatggatgatgattttgttcctggt
attaatcatagtccggttaaggctcctaggaaggttcctcgatcgccttataaggttttg
gatgcacctgctttgcaagatgatttttatctgaatctggtagattggtcttcacacaat
gtgttggctgttggtttgggtaactgtgtttatctctggaatgcttgtagcagcaaggta
actaaattatgtgatttgggggttgatgattgtgtttgttctgttggttgggctcaacgc
ggtactcatcttgctgttggaactaacaatggtaaagttcagatttgggatgcagcaaga
tgcaagaagataagatcaatggagggccatcggttacgtgtcggtgccttggcctggagt
tcatctcttttgtcttctggtggacgggataagaatatttatcaacgagatatacgcaca
caagaagattttgttagtaaactgtcaggacacaaatcagaggtttgtggactgaagtgg
tcatatgataaccgtgagttggcatctggaggaaatgacaacaaattgtttgtttggaat
caacactcaacccagcctgtcctcaagtactgtgagcacacagcagctgttaaagctatt
gcatggtctcctcatcttcatggacttcttgcatctggaggaggaactgcagatagatgt
attcgtttctggaatacaaccacaaactcacacctaagctgtatggacactggaagtcag
gtttgcaatcttgtctggtccaaaaatgtcaatgaactagtaagcacacatggctactcc
cagaaccagataattgtttggagataccccactatgtcaaagctggcgactcttaccggc
catacttatagggttctctatcttgccatctctccggatggacagactattgtaactgga
gctggagatgaaacgcttaggttctggaatgttttcccttcccctaaatcacagaatact
gaaagtgaaatcggagcattatctcttggaagaactactatcaggtga
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