Medicago truncatula (barrel medic): 25493748
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Entry
25493748 CDS
T01716
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
25493748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25493748
Membrane trafficking [BR:
mtr04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
25493748
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
25493748
NCBI-ProteinID:
XP_013457788
UniProt:
B7FN53
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All DBs
Position
4:51745711..51751156
Genome browser
AA seq
199 aa
AA seq
DB search
MKITALLVLKSTGDGSESVFLANASDVSHFGYFQRSSVKEFIVFVGRTVANRTPQGQRQS
VQHEEYKVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYIKSFGESWRSIQADSTEP
WPYLNEALAKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggctctgttggtgctaaaatccaccggcgatggttcagaatcggtgttt
ctcgcaaacgcttccgatgtgagtcacttcggttactttcaacgatccagcgttaaagag
ttcatcgttttcgtaggtcgtaccgtagctaatcgtacccctcaaggtcagcgtcaatcc
gttcagcacgaagagtacaaggtgcatgcgtacaacagaaatggactttgtgcagtggga
tttatggatgatcactatccagttcgtagtgcgttttctcttctcaatcaggtgctggat
gaatatattaaaagttttggtgaatcatggagaagcattcaggcagacagtactgaacca
tggccctatttgaatgaagctcttgcgaaattccaggaccctgcagaggctgataagttg
ttgaaaatccagagggagttggacgaaacaaaaatcatccttcacaagaccattgatagt
gtgcttgcacgaggggagaagctggacagtttagttgagaagagttctgatttgagtgca
gcatcgcagatgttctacaaacaggccaaaaaaaccaaccagtgctgtacaatattgtaa
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