KEGG   Medicago truncatula (barrel medic): 25493764
Entry
25493764          CDS       T01716                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    25493764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mtr03009]
    25493764
Ribosome biogenesis [BR:mtr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    25493764
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Utp13 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_DCAF4 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_NWD2_C Ge1_WD40 WD40_like Cytochrom_D1
Other DBs
NCBI-GeneID: 25493764
NCBI-ProteinID: XP_013457811
UniProt: A0A072UQ77
LinkDB
Position
4:complement(51850521..51859358)
AA seq 908 aa
MESLRLKTNYRCVPALQQFYTGGPYVVSSDGSFIVCACSDSIKIVDSANASIKSTLEGDS
EQVTALVLGPDDKLLFSASHSRQIRVWDLETLKCVRSWKGHEGPVMCMAVDPSGGLLATG
GADRKVLVWDVDGGFCTHYFKGHGGVVSCIMFHPDPEKQLLFSGSDDGGDNATVRVWDIS
KTKRKNCIATLDNHRSAVTSIAVSEDGWTLLSAGRDKVVTLWDLHDYSNKKTVITNEAVE
SVCAIGVGSPFASSLDSHQQNSKKHAASQALYFVTVGERGIVRIWSSEGAACLFEQKASD
VTNSVDEDGSRRGFTSAVMLGSNQGLLCVTADQQFLFYSLNWTEELLQLSLTKRLVGYNE
EVVDMKFVGDDEKFLALATNLEQVRVYDLASMSCSYVLSGHTEIILCLDTCVSSSGRNLI
VTGSKDNTVRLWESESTSCIGVGIGHMGAVGAIAFSKRKRDFFVSGSNDHTLKVWSIDGL
LDDVAAPINLKAKAVVAAHDKDINSVAIAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKG
HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV
SCGADGLVKLWTVKSNECVATYDNHEDKVWALAVGRKTETLATGGSDAVVNLWLDSTAAD
KEEAFRKEEEGVLKGQELENALSDADYTKAVRIAFELQRPHKLLELFAELCRKRGAEDHV
DRALKAFGNEELRLLFNYIREWNTKPKLCYVSQFVLFRVFNIFPPTDLVQIKGIGELLEG
LIPYSQRHFGRIDRLVRSTFLLDFILSGMSVIEPETQQTKSNDEFPLRSEIDAPDQENGI
EKKDHTIENKSASKKRKSNKSRHENGIEEKDQTLENDTASKKKKSKHGSHKKVKDVAYNK
VESIQLQA
NT seq 2727 nt   +upstreamnt  +downstreamnt
atggagtctcttcgcttgaaaaccaactaccgctgtgttccggctcttcaacagttctac
accggtggcccctacgtcgtctcatccgacggctccttcatcgtatgtgcgtgcagcgat
tccatcaaaattgttgattccgctaacgcatccattaaatccacccttgaaggtgactcc
gaacaagtcaccgccttggttctcggccccgacgataagcttctcttttctgctagtcac
agccgccaaatcagagtttgggacttggagactctcaaatgcgtgcgctcctggaagggt
catgagggtcctgttatgtgcatggctgttgatccttctggagggttgcttgctactggt
ggagcggacaggaaggttcttgtttgggatgttgatggtggtttttgcacacattacttt
aaaggtcatggtggagttgtttcatgtatcatgtttcatcccgatccggaaaaacagctt
cttttttctggtagtgatgatgggggtgataatgcaactgtaagggtttgggatatttcc
aagactaagcgaaagaactgcattgcaacactagataatcatcgctctgctgtgacttct
atcgctgtatctgaagacggatggacattgctcagtgctggaagagataaggttgtaaca
ttgtgggatcttcatgattatagcaacaagaagactgtcatcacaaatgaagcagttgaa
tctgtttgtgcaattggtgttgggagtccttttgcttcttctttggattcacatcagcaa
aactcaaaaaaacatgctgcttcccaagcactgtattttgttacagttggtgaacggggc
attgtgcgcatatggagttctgaaggtgcagcttgcttgttcgagcaaaaagcttcagat
gttacaaacagtgtagatgaagatggttcgcgaaggggcttcacttctgctgttatgctt
ggctcaaatcaaggattgctttgtgtgactgcagatcagcagtttctgttttactctcta
aactggactgaagagttgttgcaattaagtcttaccaaaagactagtgggttacaatgaa
gaggttgtagatatgaagtttgttggggatgatgaaaaattcctcgctcttgctacaaat
cttgaacaggttcgggtttatgaccttgcatccatgtcatgttcttatgtcttatctggc
cataccgaaatcattctatgtctcgacacctgtgtatcaagttccgggagaaacctaatt
gtgactggaagtaaagataatacagttaggttgtgggaatcagaaagtacaagttgcatt
ggagtcggtataggtcacatgggagctgttggagccattgccttttcaaaaagaaagcgc
gacttctttgttagtggcagcaatgatcatactcttaaggtatggagtatagacggtctc
ttggatgatgtggcagctccaattaatttaaaagcaaaagctgttgttgcagctcatgat
aaagatatcaattctgtagctattgctccaaatgatagtttagtatgtagtggatctcag
gatcgcactgcttgtgtttggagacttccagatcttgtatcagtagttgtatttaaaggg
cacaaaagaggaatttggtctgtagaattttcccctgtggatcaatgtgtagtaacagca
tctggtgacaaaacaataaggatatgggctatatctgatggctcgtgtttgaagacattt
gaagggcacacttcaagtgtgttaagagcactgtttgttactcgtggaacgcaaattgtt
tcttgtggtgctgatggtttggtaaaattatggactgtaaaatcaaatgaatgtgttgcc
acatatgacaatcatgaagacaaggtttgggccttggctgtgggcaggaaaacagaaacg
cttgcaactggtggtagtgatgctgttgtcaatctatggctagactccactgcagctgat
aaagaagaagcttttcgtaaagaggaagagggagttttgaaaggtcaagagctagagaat
gctctatcagatgctgactatactaaggcagtccgaattgcatttgaattgcaaagacct
cataaacttttggagttatttgcagaactttgcaggaagagaggggctgaagatcacgtt
gacagagcactaaaggcctttggcaatgaagagcttcgtttattatttaactatattcga
gagtggaatacaaaaccaaagctctgttatgtctcacagttcgtgctttttagagttttc
aacatctttcctccaacagatcttgttcagattaaagggatcggtgaactccttgaaggt
cttataccatatagtcagaggcactttggcaggatagacagacttgtaagaagtacattt
ttgttagacttcattctatcaggaatgtcagttattgaaccagaaacccaacagacgaaa
tcaaatgatgagtttccattacggtctgaaatcgatgctccagaccaagaaaatgggatt
gagaagaaagatcacactattgaaaataagtctgcttcgaagaaaaggaaatcaaacaaa
tctagacatgaaaatgggatcgaagaaaaggatcagactctagaaaatgatactgcttca
aagaaaaagaaatcaaaacatggttcccacaagaaagtcaaggatgttgcttacaacaaa
gtcgaatctatacaattacaagcatag

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