Medicago truncatula (barrel medic): 25493764
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Entry
25493764 CDS
T01716
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
25493764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25493764
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
25493764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Utp13
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_NWD2_C
Ge1_WD40
WD40_like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
25493764
NCBI-ProteinID:
XP_013457811
UniProt:
A0A072UQ77
LinkDB
All DBs
Position
4:complement(51850521..51859358)
Genome browser
AA seq
908 aa
AA seq
DB search
MESLRLKTNYRCVPALQQFYTGGPYVVSSDGSFIVCACSDSIKIVDSANASIKSTLEGDS
EQVTALVLGPDDKLLFSASHSRQIRVWDLETLKCVRSWKGHEGPVMCMAVDPSGGLLATG
GADRKVLVWDVDGGFCTHYFKGHGGVVSCIMFHPDPEKQLLFSGSDDGGDNATVRVWDIS
KTKRKNCIATLDNHRSAVTSIAVSEDGWTLLSAGRDKVVTLWDLHDYSNKKTVITNEAVE
SVCAIGVGSPFASSLDSHQQNSKKHAASQALYFVTVGERGIVRIWSSEGAACLFEQKASD
VTNSVDEDGSRRGFTSAVMLGSNQGLLCVTADQQFLFYSLNWTEELLQLSLTKRLVGYNE
EVVDMKFVGDDEKFLALATNLEQVRVYDLASMSCSYVLSGHTEIILCLDTCVSSSGRNLI
VTGSKDNTVRLWESESTSCIGVGIGHMGAVGAIAFSKRKRDFFVSGSNDHTLKVWSIDGL
LDDVAAPINLKAKAVVAAHDKDINSVAIAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKG
HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV
SCGADGLVKLWTVKSNECVATYDNHEDKVWALAVGRKTETLATGGSDAVVNLWLDSTAAD
KEEAFRKEEEGVLKGQELENALSDADYTKAVRIAFELQRPHKLLELFAELCRKRGAEDHV
DRALKAFGNEELRLLFNYIREWNTKPKLCYVSQFVLFRVFNIFPPTDLVQIKGIGELLEG
LIPYSQRHFGRIDRLVRSTFLLDFILSGMSVIEPETQQTKSNDEFPLRSEIDAPDQENGI
EKKDHTIENKSASKKRKSNKSRHENGIEEKDQTLENDTASKKKKSKHGSHKKVKDVAYNK
VESIQLQA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcttcgcttgaaaaccaactaccgctgtgttccggctcttcaacagttctac
accggtggcccctacgtcgtctcatccgacggctccttcatcgtatgtgcgtgcagcgat
tccatcaaaattgttgattccgctaacgcatccattaaatccacccttgaaggtgactcc
gaacaagtcaccgccttggttctcggccccgacgataagcttctcttttctgctagtcac
agccgccaaatcagagtttgggacttggagactctcaaatgcgtgcgctcctggaagggt
catgagggtcctgttatgtgcatggctgttgatccttctggagggttgcttgctactggt
ggagcggacaggaaggttcttgtttgggatgttgatggtggtttttgcacacattacttt
aaaggtcatggtggagttgtttcatgtatcatgtttcatcccgatccggaaaaacagctt
cttttttctggtagtgatgatgggggtgataatgcaactgtaagggtttgggatatttcc
aagactaagcgaaagaactgcattgcaacactagataatcatcgctctgctgtgacttct
atcgctgtatctgaagacggatggacattgctcagtgctggaagagataaggttgtaaca
ttgtgggatcttcatgattatagcaacaagaagactgtcatcacaaatgaagcagttgaa
tctgtttgtgcaattggtgttgggagtccttttgcttcttctttggattcacatcagcaa
aactcaaaaaaacatgctgcttcccaagcactgtattttgttacagttggtgaacggggc
attgtgcgcatatggagttctgaaggtgcagcttgcttgttcgagcaaaaagcttcagat
gttacaaacagtgtagatgaagatggttcgcgaaggggcttcacttctgctgttatgctt
ggctcaaatcaaggattgctttgtgtgactgcagatcagcagtttctgttttactctcta
aactggactgaagagttgttgcaattaagtcttaccaaaagactagtgggttacaatgaa
gaggttgtagatatgaagtttgttggggatgatgaaaaattcctcgctcttgctacaaat
cttgaacaggttcgggtttatgaccttgcatccatgtcatgttcttatgtcttatctggc
cataccgaaatcattctatgtctcgacacctgtgtatcaagttccgggagaaacctaatt
gtgactggaagtaaagataatacagttaggttgtgggaatcagaaagtacaagttgcatt
ggagtcggtataggtcacatgggagctgttggagccattgccttttcaaaaagaaagcgc
gacttctttgttagtggcagcaatgatcatactcttaaggtatggagtatagacggtctc
ttggatgatgtggcagctccaattaatttaaaagcaaaagctgttgttgcagctcatgat
aaagatatcaattctgtagctattgctccaaatgatagtttagtatgtagtggatctcag
gatcgcactgcttgtgtttggagacttccagatcttgtatcagtagttgtatttaaaggg
cacaaaagaggaatttggtctgtagaattttcccctgtggatcaatgtgtagtaacagca
tctggtgacaaaacaataaggatatgggctatatctgatggctcgtgtttgaagacattt
gaagggcacacttcaagtgtgttaagagcactgtttgttactcgtggaacgcaaattgtt
tcttgtggtgctgatggtttggtaaaattatggactgtaaaatcaaatgaatgtgttgcc
acatatgacaatcatgaagacaaggtttgggccttggctgtgggcaggaaaacagaaacg
cttgcaactggtggtagtgatgctgttgtcaatctatggctagactccactgcagctgat
aaagaagaagcttttcgtaaagaggaagagggagttttgaaaggtcaagagctagagaat
gctctatcagatgctgactatactaaggcagtccgaattgcatttgaattgcaaagacct
cataaacttttggagttatttgcagaactttgcaggaagagaggggctgaagatcacgtt
gacagagcactaaaggcctttggcaatgaagagcttcgtttattatttaactatattcga
gagtggaatacaaaaccaaagctctgttatgtctcacagttcgtgctttttagagttttc
aacatctttcctccaacagatcttgttcagattaaagggatcggtgaactccttgaaggt
cttataccatatagtcagaggcactttggcaggatagacagacttgtaagaagtacattt
ttgttagacttcattctatcaggaatgtcagttattgaaccagaaacccaacagacgaaa
tcaaatgatgagtttccattacggtctgaaatcgatgctccagaccaagaaaatgggatt
gagaagaaagatcacactattgaaaataagtctgcttcgaagaaaaggaaatcaaacaaa
tctagacatgaaaatgggatcgaagaaaaggatcagactctagaaaatgatactgcttca
aagaaaaagaaatcaaaacatggttcccacaagaaagtcaaggatgttgcttacaacaaa
gtcgaatctatacaattacaagcatag
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