Medicago truncatula (barrel medic): 25493878
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Entry
25493878 CDS
T01716
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mtr03110
]
25493878
Chaperones and folding catalysts [BR:
mtr03110
]
Heat shock proteins
HSP100
25493878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_18
nSTAND3
bpMoxR
AAA_14
AAA_7
IstB_IS21
ATPase_2
RuvB_N
AAA_28
TniB
DUF815
NACHT
Mg_chelatase
NBD_SMAX1
TsaE
Zeta_toxin
RNA_helicase
Roc
ABC_tran
DNA_pol3_delta2
AAA_24
AAA_25
AAA_3
T2SSE
DUF87
AAA_19
ResIII
DUF2987
Laminin_II
BRE1
RuvA_C
Motif
Other DBs
NCBI-GeneID:
25493878
NCBI-ProteinID:
XP_013457978
UniProt:
A0A072UQA8
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All DBs
Position
4:53505071..53508882
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AA seq
912 aa
AA seq
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MNPEKFTHKTNEALAGAHELAMTSGHAQITPLHLASILVSDPNGIFFQAISNVAGEESAR
AVERVLKQALKKLPSQSPPPDEVPGSTALIKAIRRAQAAQKSRGDTHLAVDQLILGILED
SQIGDLFKEAGVAVSRVKTEVEKLRGKDGKKVESASGDTNFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIA
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEG
HHGVRIQDRAIVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEKDKASKARLVDVRRELDDLRDKLQPLKMKYSKEKERIDEIRRLKQKR
EELLFALQEAERRYDLARAADLRYGAIEEVETAIKNLEGSTDGNTDENLMLTETVGPDQI
AEVVSRWTGIPVTRLGQNEKARLVGLGDRLHTRVVGQDQAVNAVAEAVLRSRAGLGRPQQ
PTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGH
EEGGQLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
TSNLGAEHLLSGLSGKCTMQAARDRVMQEVRRHFRPELLNRLDEVVVFDPLSHEQLRKVA
RLQMKDVASRLAERGIALAVTDAALDYILAESYDPVYGARPIRRWLEKKVVTELSRMLIR
EEIDENTTVYIDAGPKGSDLAYRVEKNGGIVNAETGVKSDILIQIPNGPKSDAVQAVKKM
RIEEVDDDEMEE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaaaaatttactcacaaaacaaacgaagcacttgctggtgcacacgagcta
gcaatgacttcaggccatgcacaaatcactcccttacaccttgcatcaattctagtttct
gatcctaacggtattttcttccaagcaatttcaaatgttgctggtgaagaatcagcacgt
gccgttgaacgtgttttgaaacaagcattaaagaaacttccatctcaatctcctccacca
gatgaagtacctggtagcaccgcgcttatcaaagcgattcgtagagcacaagctgctcag
aaatcacgtggtgatactcatttagctgttgatcagttaatcttgggaattcttgaggat
tctcagattggtgatttgtttaaagaagctggtgttgctgtttctagggttaaaactgag
gttgaaaagctgaggggtaaagatgggaaaaaggttgaaagtgcttccggtgatacgaat
tttcaagcattgaagacttatggtagagatttggttgaacaagcagggaagcttgatcct
gttattggacgcgacgaagagattcgaagagttgtgaggattttgtcaaggaggactaag
aataatccagttcttattggtgagcctggtgttgggaaaactgctgttgttgaagggttg
gctcagaggattgttagaggtgatgttcctagcaatcttgctgatgttaggttaattgct
ctggatatgggagcattggttgctggtgcgaagtataggggagaatttgaagagaggttg
aaggctgttttgaaagaagttgaagaagctgaagggaaggttattcttttcattgatgag
attcatcttgttcttggagctggtagaacagaaggatcaatggatgctgctaatcttttt
aagccaatgcttgctcgtggacagcttcgatgtattggtgctacaacacttgaggagtat
aggaagtatgttgaaaaagatgcagcatttgaaagaaggtttcaacaggtttatgtggct
gaacctagtgttccggatacgattagtattcttcgtggattaaaagagcgatatgagggt
catcatggtgttcgaattcaagatcgcgcgattgtagttgcagctcaattgtctagtcgg
tacataaccgggcgtcatctacctgacaaggccattgatttagttgatgaggcatgtgct
aatgtgagagttcaacttgatagtcaacctgaggaaattgacaatcttgaaaggaagaga
atgcaattagaagttgaactgcatgctctagagaaagagaaggacaaagctagcaaagcc
cgtcttgtagatgtacggagagaacttgatgacttgagagacaagcttcaacctctgaag
atgaagtatagtaaagagaaagagaggattgatgagattcgaaggctgaagcagaaacgt
gaagagctcctctttgcactacaggaggcagagaggcggtatgatctagcaagagctgcg
gacctgcgatatggtgcaattgaagaggtggaaactgcaattaaaaatcttgaaggtagc
actgatgggaacacggatgagaacttaatgttgacggaaacagttggaccggaccaaata
gccgaggttgttagccgatggactggtataccagtgactaggctcggccaaaatgagaaa
gcaaggttggttggacttggtgacagactgcacactagagtcgtgggacaagaccaagcg
gttaatgctgttgctgaggctgtattgagatcaagagctggtttaggaagaccccaacaa
ccaactggttccttcttattccttggtccgactggtgttggtaaaactgagcttgcaaag
gctcttgcagagcagctatttgatgatgaaaatcagttggtgagaattgacatgtcggaa
tacatggaacaacactctgtatcaagattgattggtgcaccaccagggtatgttggacat
gaggaagggggtcaattaacagaagctgtaaggagaaggccatacagtgttgtactcttt
gatgaagttgagaaagcacacacatctgtattcaacactcttctccaagtcttggatgat
gggaggttgactgacggacaaggcagaactgtggattttagaaacactgtgatcatcatg
acctctaaccttggtgctgagcatctcttgagtggactttcaggaaaatgtaccatgcaa
gctgctcgcgatcgagtgatgcaggaagtaagaaggcatttcaggccagaattgttgaac
cgactggacgaagttgttgtatttgatcctctatcacatgagcaattgagaaaggttgca
aggttgcaaatgaaggatgtggctagtcgtcttgctgagagaggaattgcattggcagta
acagatgcagctctagattatattcttgctgagagctatgatccagtgtatggagctaga
ccaatcagaagatggctagagaagaaggtggtgacagaactctctaggatgctcataaga
gaagaaattgatgagaatacaacggtttacatagatgctggtcctaagggaagcgatttg
gcataccgtgtagaaaagaatggagggattgttaatgctgaaactggggtgaagtctgat
atattgattcagataccgaatggacctaaaagtgatgctgttcaggctgtcaagaaaatg
agaattgaggaagttgacgatgatgaaatggaagagtga
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