Medicago truncatula (barrel medic): 25494034
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Entry
25494034 CDS
T01716
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25494034
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
25494034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
25494034
NCBI-ProteinID:
XP_013458203
UniProt:
A0A072UQX1
LinkDB
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Position
4:complement(56965814..56974540)
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AA seq
635 aa
AA seq
DB search
MGQLLPIVNEYLSVMEEDVEINDLQLNYYYRDTLLAGSDGGENYAELVKCLQPKKHLKSH
DAAQLLTTLKSLSEVVSYIDPIQHESLLSSLSRLSLWDYAPTDRKYDAAADIMDALLELI
VSLAASKGIYVDFCLELLVKHFVPPKYAFEFLKNENGVGMKNKVLSRVHAALKHIADLVP
LAPLRLSPIVVHSMPKRFAKEPEIVMYVENMLMLESGEIGEIVGGTMLPALVDKLIELDV
EIGWDGKLQEDAKCIFAMEIQDFADFEDDDEKYYSMCTTELLNRNNLQGNQVAEKLDSLI
VLTFLHLESCQSKGRLAEVFDILLTSFKRTVLNTYKSKFAQFVMFYACALDSEGCGVNFA
MVLTEMFDSRVNPPITRMSAVAYLASYLSRAKFLSSELVANIIQRLVDWCFAYCKLHDFD
MNPQAHQVFYSACQAIMYILCFRMKSLMEVPRLKVKLIKMPMELIWKHKLNPLKVCLPSV
VEEFLKQAKAARLFMSAELFIFDDLLEADLSKAFGGINRLDMFFPFDPCLLKKSESYLRP
HFVRWSKVRTTYDTYANEELSDSGSEASDDDFVDMNAKDMNDYDMAGSVEAGLDFDPDLN
KMSITPKSMKYGFQAQTEGRMPSNIRLSTTTESFV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgggacagttgcttccgattgtcaacgaatatttatctgttatggaggaggatgttgaa
atcaacgatttgcagttaaattattattatagagatacccttcttgcgggctcggatggt
ggagagaactacgccgagcttgttaagtgtttgcaaccaaaaaagcatcttaagtctcac
gacgctgctcaacttttgacaactttaaaatcgctttctgaagtagtgtcctacattgac
cctatccagcatgaatcgcttctttcttccctttcgagattgagcttgtgggattatgct
ccaactgataggaaatatgatgcagcagctgatatcatggatgctctgcttgagctcatc
gtgtcattggctgcttcgaagggaatatatgttgatttttgtttggagttgctggtcaaa
cattttgtgcctcctaaatacgcctttgaatttctgaaaaatgagaatggagttggcatg
aagaataaggttctgtctcgggtgcatgctgctttgaaacacatagctgatttggtgccc
cttgctccgttgcgattatcaccaatagttgtccacagtatgccgaaacgttttgctaag
gagcctgagattgtcatgtatgttgaaaatatgttaatgcttgagagcggtgaaattgga
gaaattgttggtggtacaatgctacctgcacttgtggataagttgatagagttggatgtg
gaaattggatgggatggcaagttacaggaggatgccaagtgcatatttgcaatggagata
caagattttgctgattttgaagatgatgatgagaaatattatagtatgtgtaccacagag
ttgttaaataggaacaatttgcaagggaatcaggttgcagagaaactagatagcctaatt
gtgctgacttttttgcatcttgaatcctgccaaagcaagggccgattggctgaggtgttt
gatattttactgacgtcatttaagagaactgtgctgaatacatacaagtcaaagtttgcc
cagtttgtgatgttctatgcatgcgcattggattccgaaggatgtggtgtgaattttgcc
atggttctcacagagatgtttgattcacgtgttaatcctcctattactaggatgagtgct
gttgcttatcttgctagttatttatctcgtgcgaagtttctttcatctgagttggttgct
aacatcatacaaagattggtagattggtgttttgcatattgcaagttacatgattttgat
atgaaccctcaagcacaccaagttttttattctgcttgccaggctatcatgtacattttg
tgctttcgcatgaaatcattgatggaggttcctagacttaaagtgaagcttatcaaaatg
cccatggagctaatctggaaacataaattgaatcccttgaaggtatgtttgcctagcgta
gtagaggaatttctaaaacaggcaaaggctgctcggcttttcatgtcagcagagttattc
attttcgatgatttgctcgaggcggatctttccaaggctttcggtgggataaatagactt
gacatgttcttcccatttgatccatgtctgttgaagaaaagtgaaagctacttaaggcca
cattttgtccgctggtcaaaggtcagaactacatatgatacatatgccaacgaggagctc
agtgatagtggaagtgaagcatcagacgatgattttgttgacatgaatgcaaaggatatg
aatgattatgatatggccgggagtgttgaagcgggtcttgattttgatcctgacttgaac
aaaatgtccatcacgcccaaatctatgaaatatgggtttcaggcacagacggaagggaga
atgccgtcgaacatcagattatctactactacagagtctttcgtttaa
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