Medicago truncatula (barrel medic): 25494064
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Entry
25494064 CDS
T01716
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR17
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
25494064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25494064
03036 Chromosome and associated proteins [BR:
mtr03036
]
25494064
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
25494064
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
25494064
RSF complex
25494064
WICH complex
25494064
B-WICH complex
25494064
NORC complex
25494064
BRF complex
25494064
NuRF complex (fruit fly)
25494064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
25494064
NCBI-ProteinID:
XP_013458239
UniProt:
A0A072V2D5
LinkDB
All DBs
Position
4:57391413..57399645
Genome browser
AA seq
1063 aa
AA seq
DB search
MARTSKSHVSSASNSSSSEEEEVENVNDQIEEEDEEELEAVARSAGSDDEDAPDEPAADD
DGVDEEDENQDESVNPEISKREKARLKELERLKKQKVQEILDAQNASIDATMNTKGKGRL
KYLLQQTELFAHFAKSGQSSSQKKAKGRGRHASKITEEEEDEEYLKEEEGGLGNTRLVTQ
PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPH
MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGSPDERKHIKEELLVAGKFDVCVTSFEMVIK
EKPTFRRFSWRYVIIDEAHRIKNENSLLSKTMREYKTNYRLLITGTPLQNNLHELWSLLN
FLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETIL
KVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTT
GDHIITSAGKMVLMDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTG
GDDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQADLQAQDRAH
RIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRF
GAEMVFSSKDSTITDEDIDRIIAKGEESTAELDAKMKKFTEDAIKFKMDDTADLLDFDDE
KDEDKVDFKKIVSDNWVEPSRRERKRNYSESEYFKQTMRQGAPTKPKEPRIPRMPQLHDF
QFFNTHRLSELYEKEVRYLMQAHQKNQVKDSIDVDEPEEVGEPLTAEESEEKEHLLEQGF
SSWSRKDFNTFIRACEKYGRNDIKSIASEMEGKTEEEVERYAEVFRERYKELNDYDRIIK
NIERGESRIARKDEIMKAIGKKLDRYKNPWLELKILYGQNKGKLYNEECDRFMICMTHKL
GYGNWDELKAAFRMSPLFRFDWFVKSRTTQELTRRCDTLIRLVEKENQEYDERERQARKE
KKLASKSTTPSKRVLPRQAESPSLKKRKQLTMDYYVSSGKRKK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggctagaacttccaaatctcacgtttctagcgcctccaattcatcttcttccgaagaa
gaagaggttgagaacgtgaacgatcagatcgaagaagaggacgaagaagaactcgaagcc
gttgctcgttccgctggctccgacgatgaggatgcgccagatgaacccgccgccgatgat
gacggcgtcgatgaagaggatgaaaatcaggatgaaagtgttaatcctgagattagtaag
cgtgagaaagctaggttaaaggaattggaacggttgaagaaacagaaggttcaggagata
ttggatgcacaaaatgcatctattgatgccactatgaatactaaaggaaaaggacgattg
aagtatctgttgcagcaaactgagttgtttgctcattttgctaaaagtggtcaatcttcg
tctcagaagaaggctaagggaaggggacgccatgcatcaaagattactgaggaagaggaa
gatgaagaataccttaaagaagaagaaggagggttaggaaatacacggctggttactcaa
ccatcatgtatccaagggaaaatgcgggattaccaacttgctgggctaaactggctcata
cgtctgtatgagaatggaataaacggaattttagctgatgaaatgggacttggcaaaact
ttacaaactatatctttgctgggctatctacatgagttcagaggaataacgggtccacat
atggttgttgctccaaaatccactcttggaaattggatgaatgagattcgacgcttttgt
ccagttttacgggcagtcaagttcctcggtagccctgatgaaaggaagcatataaaagag
gagttattggtggctggaaaatttgatgtgtgtgtgacaagttttgaaatggtaatcaag
gagaaacccacattccgtcgatttagttggcgttatgttattattgatgaagcccatcgg
ataaaaaatgagaactccctcctgtccaaaacaatgagggaatataaaacaaactaccga
ctccttataactggcacaccgctacagaacaatcttcatgaactttggtctcttctcaac
tttcttctgcctgaaatttttagttctgctgaaacttttgatgaatggtttcaaatctct
ggtgaaaatgaccaacaggaggttgttcaacaacttcacaaagtcctccgtccatttctt
cttcgcaggttgaaatcagatgtcgagaaagggttgccaccaaaaaaggaaaccattctc
aaagtaggcatgtcccaaatgcagaaacaatattataaggctttattacagaaggatctt
gaggttgtgaatgctggtggagaacggaaacgtctcctaaatatagcaatgcaacttcgt
aaatgttgtaatcacccatatcttttccaaggagctgaacctggtcctccctacacaaca
ggagatcatatcattaccagtgctggcaaaatggttctaatggataaattacttcccaag
ctaaaagagcgggattctagggtcctaatattttcacagatgactaggctgctagatata
cttgaagattatttgatgtttcgtggataccaatactgtcgcatagatggtaatactggt
ggagatgaccgtgatgcttccattgaggctttcaacaaaccaggaagtgagaaatttgtc
tttttgttgtctactcgagccggaggtcttggcatcaatcttgctactgccgatgttgtt
attctttatgatagtgactggaacccacaagctgacttgcaggctcaagatcgagctcat
aggattggtcaaaagaaagaagttcaagttttcagattttgcaccgagtatacgattgag
gaaaaagttattgaaagggcttacaaaaagcttgcacttgatgctctggtaattcagcaa
gggcgattagctgagcagaagactgttaataaagacgatttgctccaaatggttagattc
ggtgctgaaatggtttttagttccaaggacagtacaattacagatgaagatattgataga
attatcgccaaaggagaggaatcaacagctgaacttgatgctaagatgaagaaatttact
gaagatgcaatcaaatttaagatggatgacactgctgatttgcttgattttgatgatgag
aaggatgaggacaaagttgatttcaaaaaaattgtgagtgacaactgggttgagccatca
agaagagaaaggaagcgaaattactcagagtctgaatacttcaaacaaacaatgcgccaa
ggtgctcctactaaacctaaagaaccccgaattcctagaatgcctcaattgcatgatttt
cagttcttcaacacacacaggctgagtgagctgtatgaaaaggaagttcgttatctaatg
caagcacatcagaagaatcaggtaaaagactccatagatgttgatgaaccagaagaagtg
ggagagccattgactgctgaagagtccgaagaaaaggagcacctgctagagcagggattt
tcatcatggagccgaaaagattttaacactttcattagggcatgtgaaaagtatggtcga
aatgatataaaaagtattgcttctgagatggaaggaaagacggaagaagaagttgaaaga
tatgcagaagttttcagagagcgatacaaggaattgaatgattacgatagaattattaaa
aacattgaaagaggggagtctagaatagctcggaaagatgagatcatgaaagctattggg
aagaagttagaccgctacaagaatccttggctagagttgaagatactatatggacaaaac
aaagggaaattatacaatgaagaatgtgatcgattcatgatatgcatgactcacaagctt
ggctatggtaattgggatgaattgaaagctgcatttcgaatgtcacccttgtttcgtttt
gattggtttgtaaagtcacgcacaactcaggaattaacaaggagatgtgacaccctcatt
cgtttggtagagaaggaaaatcaagaatatgatgaaagagagagacaagctcgtaaagag
aagaaacttgcctccaagagtacaactccatcaaagcgcgtcttaccaagacaggcagag
agtccatctctgaagaagcggaagcagttaactatggattactatgttagctcggggaag
agaaaaaagtaa
DBGET
integrated database retrieval system
