Medicago truncatula (barrel medic): 25494084
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Entry
25494084 CDS
T01716
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
25494084
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
25494084
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
25494084
NCBI-ProteinID:
XP_013458272
UniProt:
A0A072UTA9
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Position
4:58022186..58024115
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AA seq
422 aa
AA seq
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MAVAKSVVILILLFALASYADAAPKPRPPVGHDVFGVRKSSKDVLLPGEKLVNVLSFGAK
GDGVTDCTQAFMQTWQAVCKKPGQNRFYVPAGRFLVSEIIFAGPCLAPKPVTIQVVGTIL
ATTDISEYANGRWFEFQDLNGLKMLGGGTFDGQGQESWKFAEDCKSGNGDTACVPNPPSL
YFTKVQNAIIMGIKSVNPKGFHVFVTQCSNIRLQRLRLTAPDTSPNTDGIHISTSYGVKI
NRCTIGTGDDCVGMIDGSEQIAINKLKCGPGHGISIGSLGRRADEREVKGVRVQNSELIG
TDNGLRIKSFPERFAGGASEIFFTNINMTNVKNPIIIDQEYECDDICKKKPSLVKIANIH
FSNIRGTSATPMVVDMRCSKMHTCPGVTFNNVDLKFGSALTTARCVNVKPVYTGLAKPPI
CP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgcaaagagtgttgttattcttattttgctctttgcattggccagttatgca
gatgctgctcctaaaccaaggcctcccgttggtcatgatgttttcggggttagaaaaagc
tctaaggatgtcctccttcccggggagaaactagttaatgtcttgagttttggcgccaaa
ggtgatggtgtgactgattgcactcaggctttcatgcagacatggcaagcagtctgcaaa
aaaccaggacaaaacaggttttatgttcctgctggtagatttttggtttcggaaataatt
tttgcaggaccatgtcttgctccaaagccagtaacaattcaagtggtaggaactattttg
gctaccactgatatttctgagtatgcaaacggaagatggttcgagtttcaagacttgaat
ggcctaaaaatgctcggtggaggtacttttgatggacaaggtcaagaatcatggaaattc
gctgaggattgtaaatctggcaacggagatactgcttgtgtgccaaatccacccagtttg
tatttcacaaaagtgcaaaatgcaattataatgggcattaaatcagtgaatcccaaagga
tttcacgtattcgttactcaatgttcaaacattaggttgcaaagacttaggctcactgca
cctgataccagcccaaacactgatggcattcatattagcacctcctacggtgtgaaaata
aatagatgcaccattggaaccggggatgattgtgtcggtatgatagacggttctgaacaa
attgcgatcaacaaactcaaatgtggacctggacatggtatcagtatcggtagtcttgga
aggagagcagacgagcgagaggtgaaaggtgtaagggtacagaacagtgaattgattggc
acagacaacggtttgagaataaaatcatttccagagagatttgctggtggagcatctgag
atatttttcactaacattaacatgacaaatgttaaaaatccaatcattattgaccaggaa
tatgaatgtgatgatatttgtaaaaagaagccttcattggtgaagattgcaaatattcat
ttttcaaatataaggggaacttcagctacaccaatggtagtggatatgagatgcagcaag
atgcatacatgccccggtgttacatttaataacgtcgacctaaagtttggatcagccctt
accacagctagatgtgtcaatgttaagcctgtctatactggcttggcaaagccaccaatt
tgcccataa
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