Medicago truncatula (barrel medic): 25494176
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Entry
25494176 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25494176
KO
K15082
DNA repair protein RAD7
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25494176
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
25494176
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
Ran-binding
Motif
Other DBs
NCBI-GeneID:
25494176
NCBI-ProteinID:
XP_024636594
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Position
4:complement(60121657..60129781)
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AA seq
637 aa
AA seq
DB search
MDPPNPNDVPPIEDITSITEQLKGHGFSNKEIGAILTLAPSTYVPESPNHIHRDERPHEP
FLKRGTEPDSDDASSSKRTKLYNFENTSDPKGKKPLIDDHHQRKEIPENQLPLAFDINAY
NINSETETDDSDNDDDFEICRNESFIRSQYKLFNKDTAKRFASRIHSVSENKEKDDDVEH
EVDDDSPTPFSKAVKAIQERITKSNKRGFVDESLTWVSKLNGEDFVRGRLCVPSLLEMSL
KILANHVDGLASLDGVSDALKQRLSALLCDSRKMNAHSLELLLSGFPNVIRLKDCSWMTE
EEFTKYFGKLDNSILEVLQLQQCGRIITEYTLPCTLAKSPNCLSRLISLSLTGACRLSDK
GLQLLVSSATTLRSINLSQCSLLTFASLDILADSLGSLLKELYLDDCILIDVALILSALK
RLEHLEVLSLAGLPTVTDKFIKNYIITCGHNINELVLRDCVNLTDASMKFIAEHCPELHA
LDITNLCKLTDLTIRYLANSCRALLNLKLCRNSFSDEAIAAFLEINGKSLEELSLNNIKK
VGQQTSLSLAKNAKNLHTLDLSWCRNLTDNEFGLIVDSCSSLRFLKLFGCSQVTNAFLKG
HSNSELQIIGLKLCPLLQHIKEPNPHQSVLRYSSVSQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggacccacccaatcccaacgatgtccctcccattgaggatataacttctatcacagaa
caactaaagggccacggtttttccaacaaagaaattggtgcaatccttaccttagcccca
tcaacatatgttcctgaatctcccaatcatattcatagagatgaaagaccacatgaaccc
tttctcaagagaggaacggaacccgactccgatgatgcctcttcttctaaacgcacaaaa
ctctacaactttgaaaacacttctgatccaaaaggaaagaaaccactcattgatgatcat
catcagaggaaggaaataccagaaaatcaactacctttggcttttgatatcaatgcttat
aatattaacagcgaaactgaaactgatgatagcgacaacgatgatgattttgagatttgt
aggaacgagtcatttattagaagtcagtacaagctatttaacaaagacactgcaaagaga
tttgcgtcacgcattcatagtgtttcagagaataaagaaaaagatgatgatgtggaacat
gaagttgatgatgattctccaactcctttctctaaagcagtcaaagctattcaagaacga
attactaaaagcaacaaaagggggtttgtcgatgaatcccttacttgggtttcaaaactg
aatggtgaagattttgtgaggggaagattatgtgttccttcactgctagaaatgtctctt
aaaattcttgccaatcatgttgatggacttgcttcgcttgatggtgtttctgatgcacta
aaacaaaggcttagcgcgttgctttgtgattcaagaaaaatgaatgctcactctcttgaa
ctacttctaagtggatttccaaatgtgattcggcttaaagattgctcttggatgacagag
gaagaatttacaaaatattttggaaagttggacaattccatattagaggttctgcaactt
cagcaatgtggacgaattataactgaatatacattaccttgtacattggcaaagtcacca
aactgcttgtctagattgattagtctatctctcaccggtgcatgtcgtctttctgataaa
gggttgcagttactagtttcttctgcaacaacacttagatccataaatctaagccaatgt
tcccttctcacttttgctagtctcgatattttggctgattcattaggatcacttttgaag
gagttatatcttgatgattgtatactcattgatgttgcactaattttatcggcattgaag
agactcgaacatttagaagtgttgtcactagctggacttcctactgttactgataaattc
atcaagaattatatcattacatgtggtcacaacattaatgagcttgttttaagggactgt
gtgaatttgactgatgcatcaatgaaattcattgctgaacattgtcctgagttgcatgca
cttgatattacaaacttgtgcaaattgacagatttaaccataagatatcttgcaaatagt
tgtcgagcattgcttaatctgaagctatgccgcaattcattcagcgatgaagcaattgct
gcatttttggagataaatggcaaatccttggaagaactttcacttaataacattaagaag
gttggccaacaaacaagcttatcacttgcaaagaatgccaaaaatttgcataccttagat
ttatcatggtgtcgaaacttgacagacaatgagtttggtttaattgtcgatagctgctcg
tcattgaggttccttaaactttttggatgctcacaggtaacaaatgcttttctcaaaggt
cactcaaactcagagcttcagatcattgggttgaagttgtgtcctttattgcagcatatc
aaagagcctaatcctcatcaaagtgttttgcgatattcatcagtctcgcagtag
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