Medicago truncatula (barrel medic): 25494466
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Entry
25494466 CDS
T01716
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25494466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25494466
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
25494466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
25494466
NCBI-ProteinID:
XP_013453281
UniProt:
A0A072UN86
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All DBs
Position
5:complement(105967..115583)
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AA seq
945 aa
AA seq
DB search
MLEEDEDVVLLSSSSFSSDSDEEVEVSSSSSSSSSSDSEIEQVSQRKSQNVEALIKGNLI
VKRQSLLPRVYSTNGAAAICRKPFKPPSDAYNNNNNQDLARRLSARKRFVPWGSTTPIPI
PTSTTPLTELDLNISDHKEEAVKPSPPLPPEIDPLILWQPLHDNDPSNSNFTTIAVDPLL
VRFLRPHQREGVQFMFDCVAGLCETPDINGCILADDMGLGKTLQSITLLYTLICQGFDGK
PMVRKAIIVTPTSLVSNWEAEIKKWVGDRVRLVALCETTRQDVISGINSFKSPQGKFQVL
IVSYETFRMHSEKFSSSGSCDLLICDEAHRLKNDQTITNKALAALPCKRRVLLSGTPLQN
DLEEFFAMVNFTNPGILGGIAHFRRHFEAPIICGREPAATAEEKKLGAERTAELSAKVNQ
FILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYKHFIQSKNVKRAITEELKHSKILAYI
TALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPNMLSGRSGSWTGGDGGWVELSGKM
QVLARLLHQLRQRTNDRIVLVSNYTQTLDLFAQLCRERKYPHLRLDGATSISKRQKLVNC
LNDPSKDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYI
YRFLSAGTIEEKVYQRQMAKEGLQKVIQREQNDSVAAQSNFLSTEDLRNLFTFDENVKSE
IHENMRCSRCQNNDGPQDTDVLSTMINSECGDDETADIGGFAEIAGCLGNLKTSEKQVGN
PLEEDLSSWGHHLFPTSVPDGVLQASAGDEVTFVFTNQVDGKLVPVDSISPKLQKKELHK
PSRNVERKSTPFALHNKLVPLRSASNIANVSCSSSIAWTKKAKNCERTTQNIAMSVALNT
KHSLVNELPRQKRSYPADSNDGHSFVNQISPKKACHVDNNDENFE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggaagacgaagacgtagttttgttgtcatcgtcgtctttttcttctgattcc
gatgaagaagttgaagtgtcatcgtcttcttcttcttcttcttcttctgattccgaaatt
gaacaagtttcacaacggaaatctcagaatgtagaagccctaatcaaaggtaaccttatt
gtgaagagacagtcgttgctgccgagagtatattccaccaatggagctgccgctatttgc
agaaaaccgtttaaaccaccgtccgatgcttacaacaataacaataatcaagatcttgct
cgtaggctctctgctcgcaaaagatttgtcccatggggttctaccactcctattcctatt
cccacctccaccacacctttgacggagttggatttgaatatctctgatcacaaagaggag
gctgtcaaaccctcgccgcctttgccccctgaaattgatcctctaatactctggcaacct
cttcacgacaacgacccttctaattctaatttcacaacaatagccgttgatcctttgctt
gttcgtttccttcgtccacatcagagagaaggggttcaattcatgtttgattgtgtcgcc
ggactatgtgagacacccgatatcaatggatgcattttggcagatgatatgggtttgggg
aagacactgcagtccatcacattactatatactcttatttgtcaaggtttcgatgggaag
cctatggttagaaaggccatcattgtcactcctaccagtctcgttagcaattgggaagca
gaaattaagaagtgggttggagatagagttcgccttgttgctctttgtgaaaccacaaga
caagatgttatctccgggattaacagttttaaaagtccccaaggcaaattccaggtgctc
attgtttcatacgagacattccgaatgcattcagagaagtttagctctagtggctcctgt
gatctcctcatctgtgatgaggctcacagactgaaaaatgatcagacaataacaaacaag
gcattggctgctctcccgtgtaaacgtagagttttgctgtcaggaactcctttgcagaat
gacttggaagaattctttgcaatggttaattttaccaatcctggaatattgggcggcatt
gcacattttcgacgtcactttgaggcgccaataatttgcggaagagaacctgctgctact
gcagaagagaagaaactcggtgctgaacgcactgcagaattaagtgccaaagttaatcag
ttcatattaagaaggactaatgcattgctatcaaatcacttaccaccgaagataattgaa
gttgtttgctgcaagttgactccgctacaatcagatctatataaacattttatacagtcc
aaaaatgttaaacgggcgattactgaagaactgaagcattcgaagattttggcctacatt
acggctctaaaaaagttatgcaatcatccaaagctcatatatgataccatacgaagtggg
agcccaggaacttcaggttttgaggactgcatccgattcttccctccaaatatgttatct
ggaaggtctggatcatggacaggaggggatggaggctgggttgagctttccggtaaaatg
caagtcttggcaaggttacttcatcaattacgccagagaacaaatgatcgcattgtcctt
gtctcaaactatactcagactcttgatctttttgctcaattgtgccgggaacgaaagtac
cctcacttgaggcttgatggtgctacatcaatcagtaaaaggcaaaagttggtcaactgc
ttgaacgacccgtctaaggacgaatttgtttttctcttaagcagcaaggctggtggttgt
ggactcaatttgattggggcaaatcgactcgtcttgtttgatcctgattggaatccagca
aatgataaacaagccgcagcaagagtgtggagggatggacagaagaaaagagtttacatt
tatagatttttgagtgccggaacaatagaagaaaaggtctaccagcgtcagatggcaaaa
gaagggctgcaaaaggtcattcagagggagcaaaacgacagcgtcgcggcacagagtaac
tttctctcgacagaggatcttcgcaatttgtttacttttgatgagaacgtcaagtcagag
attcatgaaaatatgcgatgcagtcgttgccaaaacaatgatgggccgcaagacactgat
gttttatcaacaatgattaatagcgaatgtggtgatgatgaaaccgctgatataggtgga
tttgctgagattgcaggctgcttagggaatttgaaaacatcagaaaagcaggtagggaat
ccattagaagaagatttaagtagttggggccatcatttattcccaacctctgtaccagat
ggcgtccttcaggcttcagccggtgatgaggtgacttttgtcttcacaaaccaagttgat
ggaaagctggtaccggttgactccataagtcccaagctacagaaaaaggaattacacaag
ccaagccgcaacgtcgagcgaaaatccaccccttttgctttacacaataagcttgtacca
ctacgttctgcatccaatattgccaatgtgtcatgctcatcttcaattgcttggacgaag
aaggcaaaaaattgtgaaagaactactcaaaatatcgccatgagtgtagcattaaacacc
aaacactctcttgtaaatgaattaccaagacagaaaagatcataccctgctgattccaat
gatggccactcttttgtaaatcaaatatcaccgaaaaaagcatgtcatgttgataacaat
gatgaaaattttgagtaa
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