Medicago truncatula (barrel medic): 25495147
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Entry
25495147 CDS
T01716
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
25495147
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25495147
03041 Spliceosome [BR:
mtr03041
]
25495147
Protein phosphatases and associated proteins [BR:
mtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
25495147
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
25495147
Spliceosome [BR:
mtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
25495147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
zf-CCCH
DUF4407
Motif
Other DBs
NCBI-GeneID:
25495147
NCBI-ProteinID:
XP_013450769
UniProt:
A0A072U532
LinkDB
All DBs
Position
6:542918..551209
Genome browser
AA seq
910 aa
AA seq
DB search
MELKASSPKPESVVPSDCASDPEETEVSDDDDDDRNHKHRKKEDRSQSLERDVSDPVINR
PFKKCHKNFGNRHPFRENESMAFETLRTYNDATTDKDFYSKFDRRRPGMTSGPRMPFDMN
QRIRPNQLFAGDPGAGRGRGRESGFWNQRESRFSSIDVASQMVQQGPIHPALYTGRGLPN
ISNAQNASWNTFGLLPAVPNGGLDMLHPMGLQGTLRPPINSSLNVNIPRQRCRDFEERGF
CLRGDMCPMEHGVNRIVVEDVQSLSQFNLPVSLTSAHLTGAPTGSGSLHSVNNSTASMNS
KCKPGIISKSIVSDVGSSMDGAYPGPGCTSGADLYDPDQPLWNDRGLEIDDAEPMSSDAP
DSVCPVEATRTSVSLQGASSSVWGRIGGSKNRFDTKEKSNPTMSSFHFPDNQPKEDNDEL
VGCHSASSQGKQIIADDAIPRAFEASLKAQIDMRNIRKPSQKALRTLFVNGIPHKSNRRD
ALLAHFKKFGEVIDIYIPLNSERAFVQFSKREEAEAALRAPDAVMGNRFIKLWWANRDCI
PSENTSSSSGNGAIVTPRGQPTFVPSHPVATDRRKDIHQPDASRTTFEESSPSDPSKLVI
ADAPKVPPPLQRKLENLEHLKEQLRKKQEMLDQKRNEFKRQLNKLEKQATGPKGEAVTEQ
PAKRPKTSMASDVAKLASPQSSDADIGMSSSQAETAVDKNKQLANSVSQSPKPSTPRKPH
EPAGLKQSIQSLVPVNRYKLDNRPTAFRIIPPLPVGLANVAALEEHFLPYGELSAVELED
VQVNDSSEQEARLNFTTRGAAEQAFTKGKCWKDHNLKFMWLTPTNSGNATVSRERSLSAP
PSEPLDTTNSNSEEKSRNSANHEAIVSDGEHKDSETKNDLENMKTEQDEDLQCTTSQVSS
AKQSPENNVC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagcttcatctccaaagccagagtctgttgtgccatctgattgtgccagt
gatcctgaagaaacggaagtgagcgacgacgacgacgatgatcggaatcataagcatcgg
aagaaggaagatcgttctcaatcattagagagagatgtttcagatcctgtaattaacagg
ccattcaaaaagtgtcacaaaaattttgggaatcgccatccgttcagagaaaatgaatcg
atggcctttgaaacactgagaacctacaatgatgccaccacagataaagatttttactcc
aagtttgacagaaggcgccctgggatgacttcaggtcctcgaatgccttttgatatgaat
caaagaatacggccaaaccaattatttgccggagatcctggtgctggtaggggaagaggc
agggaatccggtttttggaatcaacgtgaatccaggttcagctcaattgatgttgcttca
caaatggttcagcagggacccattcatccagccctttatactggacgtgggttaccaaat
atatcaaatgcacaaaatgcgtcttggaatacatttggtttacttccagcagtacccaat
ggtggcttagacatgcttcatccaatgggtttacaaggaacactcagaccacctattaat
tcatctttaaatgtgaatattcctcgtcaacgatgcagagattttgaagaacgtggattt
tgccttagaggggacatgtgtcctatggaacatggtgtaaatcgaattgtcgttgaagat
gttcagagtctttcacagttcaaccttcctgtttcgcttacaagtgcacacctaactgga
gcacctactggatctggatcactgcattcagtaaataattcaactgcttcaatgaacagc
aaatgtaaacctggaataatttccaagtccattgtcagtgatgttggttcgtcgatggat
ggtgcatatcccggtcctggttgcacaagtggagctgatctttatgatccagatcaacca
ctgtggaatgataggggtctggagatcgatgatgctgagcctatgtctagtgatgctcca
gatagtgtttgtccagttgaagctaccagaacttctgtcagtttacagggtgccagttca
tctgtctggggcagaattggtggttcaaaaaatagattcgacacgaaagaaaaatccaac
cctacaatgagttcttttcattttcctgataatcaaccaaaggaagataatgatgaatta
gtaggttgtcacagtgcttccagtcaaggtaagcagatcattgcagatgatgctatcccg
agagcctttgaagcatctttgaaggcacagattgatatgcgtaacatacgtaaaccatca
cagaaggcactgcgtactctatttgtaaatgggatacctcataaaagtaacaggagggac
gctcttcttgctcattttaagaagtttggggaagttattgacatttatattccattgaac
agtgaacgagcttttgtccaattctccaagagggaagaggctgaggctgctctaagggca
cctgatgctgtaatgggcaatcgtttcatcaagctgtggtgggctaatcgtgattgtatc
cctagtgaaaatactagtagtagtagtgggaatggtgcaattgtaactccccgtgggcaa
cccactttcgttccatctcatccagttgccactgataggagaaaagatatccatcaaccc
gatgcttcaaggactacatttgaagaatcatcaccttctgatccgtctaagctggtaatt
gcagatgcacccaaggttccacctcctttgcagaggaagcttgaaaacttggagcatcta
aaggaacaactgcgtaagaagcaggaaatgctggaccaaaagcgtaacgagttcaagcgc
cagttgaacaaacttgagaaacaagctacaggacccaagggggaagctgttactgagcaa
cctgccaagagacccaaaacgagcatggcgtctgatgttgccaaactggcttctcctcaa
tcgtctgatgctgatattggtatgtcatcttcacaagcagagacagcagtggataaaaat
aaacagttggccaattctgtttcccaaagtcccaaaccaagtacaccgaggaaaccacat
gaacctgcaggattgaagcagtcaattcaatcattagtgcctgtaaatagatacaagctg
gataatcgtcccaccgcattcagaatcattccacctttgccagtcggtctagcaaatgtt
gctgctttggaggaacacttcttaccatacggtgaactttccgctgtagagctagaagat
gtccaagtcaacgatagtagcgaacaagaggcacgtctaaatttcactactcgtggagca
gctgagcaggcgtttacaaaaggtaaatgctggaaagaccataaccttaaattcatgtgg
ctgacacctaccaattctggcaacgccactgtcagtagagaacgttctctgtctgctcct
cccagcgagcccttggatacaacaaatagcaattctgaagagaaatcgcgaaactctgca
aaccatgaagcaattgtgtctgacggtgagcataaagattccgaaactaaaaatgatttg
gagaatatgaaaacagaacaagatgaagatctccagtgtaccaccagtcaagtttcttct
gccaaacaatcacccgaaaacaatgtctgctga
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