Medicago truncatula (barrel medic): 25495527
Help
Entry
25495527 CDS
T01716
Name
(RefSeq) tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00260
Glycine, serine and threonine metabolism
mtr00400
Phenylalanine, tyrosine and tryptophan biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
mtr01230
Biosynthesis of amino acids
Module
mtr_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
25495527
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
25495527
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
25495527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
HYR_4C
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-GeneID:
25495527
NCBI-ProteinID:
XP_013451204
UniProt:
A0A072U669
LinkDB
All DBs
Position
6:6368651..6372995
Genome browser
AA seq
501 aa
AA seq
DB search
MKSVSNISCVFSLPNSSPYFNFQVEKQWPQRFSLSTKPMHLRYSNGCKVRATLDTNKSIE
IPHQWYNLIADLPIKPPPPLHPKTFEPIKPEDLSPLFPDELIRQEVTTDRFIDIPDEVRD
VYSLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAIPQAWYNLQEGVKNVV
TETGAGQWGSALAFACSIFGLGCEVWQVRASYDSKPYRRLMMQTWGANVHPSPSMLTEAG
QRILQNDPTSPGSLGIAISEAVEIAAKNPDTKYCLGSVLNHVLLHQSVIGEECIKQMEAI
GETPDVIIGCTGGGSNFAGLSFPFIREKLNNKINPVIRAVEPTACPSLTKGIYTYDYGDT
AGLTPLMKMHTLGHDFVPDPIHAGGLRYHGMAPLISHVYELGLMEAISIPQTECFQGAIQ
FARSEGLIPAPEPTHAIAATIREALHCRETGEAKVILTAMCGHGHFDLPAYEKYLQGNMV
DLSFSEDRLKASLGNISKVTS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgtcagtaatatttcatgtgtgttctcacttcctaattcatcaccttacttc
aactttcaagttgaaaagcaatggcctcaaagattttccttgagtacaaagccaatgcat
ctaaggtattcaaatggatgcaaagtgagagcaacattggatactaataaatcaattgaa
attcctcatcaatggtacaatctaattgctgatcttccaataaaaccacctccaccattg
catcccaagacttttgaaccaatcaagccagaagacttgtcacctctttttcctgacgag
ttaatcagacaagaagtgacaactgatagattcatagatataccggatgaagttcgtgat
gtttacagtctttggcgcccaactcctctcatcagagccaagaggttggaaaagcttctt
gatacacctgctagaatttactacaaatacgaaggtgtaagtccagcagggtcacacaaa
cctaactctgctattccacaagcatggtataatttacaagaaggtgtcaagaatgttgtg
acagaaactggtgctggacaatggggaagtgcattagcctttgcttgcagcatatttggc
cttggatgtgaggtgtggcaagtacgcgcttcgtatgattcgaaaccgtatcgaagattg
atgatgcaaacatggggagcaaatgtgcatccatctccatctatgcttaccgaggcaggt
caaagaattcttcaaaatgatccaacaagtccagggagtttaggcatagctatatcagaa
gctgtggaaatagctgctaaaaatcctgataccaagtactgtttaggaagtgtactaaat
catgttttacttcaccaaagtgttattggagaagagtgcattaagcaaatggaagctatt
ggagaaactcctgatgttatcataggatgtaccggtggtggatccaattttgccggactc
agttttcctttcattagggagaagcttaataacaaaattaatcctgtgattagagctgtt
gaacctacagcatgtccttcattaacaaaagggatatatacttatgattatggtgataca
gcagggttgactcctttgatgaaaatgcatacacttggccatgactttgttcctgatcca
attcatgctggggggttgcgctatcatggtatggcaccattgatctcacatgtttatgag
ttaggtttaatggaagcaatttctattccacaaactgaatgctttcaaggtgctatacag
tttgcaaggtccgaagggttgataccagctcctgaaccaactcatgcaatagctgcaacc
attagagaagctcttcattgtagagagactggagaggctaaggttattttgacagcaatg
tgtggacatggccattttgacctaccagcttatgagaagtatttgcaaggtaatatggtt
gatctttccttctcagaggacaggttgaaagcttcacttggaaatatttctaaagtgaca
tcttga
DBGET
integrated database retrieval system