Medicago truncatula (barrel medic): 25495815
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Entry
25495815 CDS
T01716
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25495815
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
25495815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_ribbon_3
Las1
Motif
Other DBs
NCBI-GeneID:
25495815
NCBI-ProteinID:
XP_013451516
UniProt:
A0A072U701
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Position
6:complement(10001328..10015656)
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AA seq
624 aa
AA seq
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MVNCDHCLRNVSGTRIDEGQLCCEYCGKVLEECFLSNEPTFQKGAAGQSKFSGNLIRAVN
EMADSRQRTTDRATENIRNLCRNLGMDDYSVADAAVKFYIIGLEKNFTRGRRSELVQAAC
LYLAFRDNDKPYLLIDFSNAIRTNVYALGSVFLQLLKVLRLEEHPIARKLVDPSLFIFKF
THTLLKQRNVAVSESALNILSDMKRNWMQTGRKPSGLCGAALYMAALANGFPCSKSDVLR
VVHVCEATLTKRLIEFENTESSSLTIDELNAMAKEHENRPIKIPNGEPTKYIPEEEEEEE
EEGEEGDPLTKKKKKKDPLRCEHKGMDPPIPLFALGLCETCYRFFDKLSGGLGGGLDPPA
FQRAEKDRMVKSHSEENANKSDDLAMDSNDAYESQIELHTSEPGNIGGEHVATKDGEHDE
SRIEDDMNEKTHDESESLSDIDDKEVDGYLHNEEETRYKKQIWEFNNREYLEEQAVKEAA
AAAERRRLEEELKNCTPEEREARELKGAVAADVAKSRKEKRKQRAEEERRLGPAQSAVEA
TSRMLKTKRLSSKVNLDRLDKLFDKPAAPENPKKVRFETKEDELEPVNEFPADEDMYAEY
DDTMYPENNYETYDYEEAGGFYEY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattgtgatcactgtttgaggaacgtttctggaactcgaattgacgagggtcaa
ttgtgttgtgagtattgtgggaaggtgttggaagaatgctttttatctaacgagccaact
tttcagaaaggcgctgctggacagagcaaattctcaggcaatttgataagggcggttaat
gaaatggctgactcacgtcaaaggactacagatagagctacagaaaatattagaaatcta
tgtcgcaaccttggaatggatgattatagtgtagctgatgcagctgtgaaattttatata
ataggactagagaaaaactttaccaggggacgtagatctgaacttgtacaagctgcttgt
ctctatcttgcattccgggataacgataagccataccttcttattgatttttcaaatgct
ataaggacaaatgtttatgcgcttggctcagtttttttgcagcttttgaaagtgttaagg
cttgaagaacacccgattgctcgaaagcttgttgatcccagtctttttattttcaaattt
acacatactttgttaaagcaaaggaatgtggctgtctctgaatctgcgctgaatattctt
tctgacatgaaacgtaactggatgcagacagggaggaagcctagcggattatgcggtgct
gcgttatacatggctgctcttgcaaatggttttccatgctcgaaatcagatgttctaaga
gtcgtccatgtatgtgaagcaacattgaccaagcggctgatagagtttgagaacacagag
tcttccagcttgacaattgatgagttgaatgcaatggcaaaagagcatgaaaaccgtcca
attaaaataccaaatggtgaaccgaccaaatacattccagaggaggaggaggaggaggag
gaggagggggaggagggggaccccctaacaaagaagaagaagaagaaggaccccctaagg
tgtgaacacaagggtatggatcctccaatacccctctttgcacttggattgtgcgaaaca
tgttacagattttttgataaactctctggtggacttggtggtggtttggatcctcctgca
ttccagcgtgctgagaaggatagaatggtgaagtcacattctgaggagaatgctaataaa
tcagatgatttggcaatggattcaaatgatgcatacgagagccaaatagagttgcatacc
tccgagcctggaaatattgggggagagcatgtggccactaaagatggtgaacatgatgag
tctcgtatagaagatgatatgaatgaaaaaactcatgatgaatcagaaagtctctctgat
attgatgataaggaggttgatggctaccttcacaacgaagaggaaacacgttacaagaag
cagatatgggaatttaataatcgagagtatcttgaggaacaagctgtcaaggaagcagct
gcagcagctgaaaggagaagattagaggaggaattaaaaaattgtacccctgaagagcgt
gaagcaagagaacttaagggagctgttgctgcagatgtggcaaaatccagaaaggaaaag
agaaaacaacgagctgaagaggaaagaaggttgggtcctgctcaatctgctgtagaggca
actagccgaatgttgaaaacaaagaggctcagctccaaagtcaatttggatcgcttggat
aaattattcgataaacctgcagctccagagaatcccaagaaagtacgatttgaaacaaag
gaggatgaattggaaccagtcaacgaatttccggctgatgaagatatgtatgcagaatat
gatgatactatgtatccagaaaataactacgagacatacgactacgaggaagccggtggt
ttttatgaatattga
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