Medicago truncatula (barrel medic): 25495823
Help
Entry
25495823 CDS
T01716
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03030
DNA replication
mtr03410
Base excision repair
mtr03420
Nucleotide excision repair
mtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
25495823
03410 Base excision repair
25495823
03420 Nucleotide excision repair
25495823
03430 Mismatch repair
25495823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
25495823
03036 Chromosome and associated proteins [BR:
mtr03036
]
25495823
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25495823
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
25495823
DNA Replication Termination Factors
ELG1-RFC complex
25495823
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
25495823
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
25495823
Check point factors
HRAD17(Rad24)-RFC complex
25495823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_lid_RFC1
Rad17
Sigma54_activ_2
ABC_tran
RsgA_GTPase
nSTAND6
DUF815
AAA_29
AAA_22
AAA_5
AAA_16
nSTAND3
AAA_23
Mg_chelatase
RuvB_N
AAA_24
T2SSE
AAA_2
Motif
Other DBs
NCBI-GeneID:
25495823
NCBI-ProteinID:
XP_013451525
UniProt:
A0A072U8X4
LinkDB
All DBs
Position
6:10067270..10073074
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDNALVHNDTAQNLKKLVSEHDCPHLLFYGPSGSGKKTLIMALLRQMFG
PGAEKVKVENRAWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQY
PFTDKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPGIILKRLLYE
LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagacaagtatcgtcccaaaaccctagacaatgctctggttcacaacgac
accgctcaaaatctcaaaaaattggtttcggaacatgattgtccccatttgttgttctat
ggtccttcaggctctggcaagaaaaccctaatcatggctcttctccgtcaaatgtttgga
cctggtgccgaaaaggtgaaggtggagaatagggcatggaaagttgacgcagggagtaga
tctattgatctagagctgacgacattatcaagtgccaatcatattgaaatgactccgagc
gatgcaggctttcaggacagatacattgttcaagaaataatcaaagaaatggctaaaaat
agacccattgatactaaagggaagaaaggatttaaagtgctggtgcttaatgatgtggac
aaactctctagagaagctcaacattcacttcgcagaacgatggagaaatacagtgcttat
tgcagattaattttatgttgcaatagttcttcaagagtcacagaagccatccggtcccgt
tgtcttaatgtacgaataaatgcaccaagtgaagaacagattgttgaagttttacagttc
attggtaagaaagaagggctacaacttccttctagttttgctgctcgtatagcagagaaa
tcaaatcggaatttgaggagggccatattatcatttgagacttgccgtgtccaacagtat
cctttcactgacaaacaaacaattcctccaatggactgggaggaatatatttcagaaatt
gcatctgacataatgaaagaacagagcccaaaaaggttgtttcaagttcgaggaaagttg
tatgagcttctaatcaactgtattcctccagggatcattttgaagaggctactttatgag
cttttgaggaaactggatgctgaactgaagcacgaagtttgccattgggcagcatattat
gaacataggatgcgccttggacaaaaggccatttttcacatcgaagcatttgtggccaag
ttcatgagcatctacaaatccttcctcattgcaacatttggctga
DBGET
integrated database retrieval system
