Medicago truncatula (barrel medic): 25495886
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Entry
25495886 CDS
T01716
Name
(RefSeq) LOW QUALITY PROTEIN: protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25495886
03460 Fanconi anemia pathway
25495886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25495886
03036 Chromosome and associated proteins [BR:
mtr03036
]
25495886
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25495886
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
25495886
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
25495886
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
25495886
FA (Fanconi anemia) pathway
Downstream FA components
25495886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
25495886
NCBI-ProteinID:
XP_024642147
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Position
6:10921430..10927876
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AA seq
665 aa
AA seq
DB search
MRGSYGLSKLSSGASGCKRKVSTRYPSRHARIHIKEFFAVPPLKKKVHFPNPVRQVTSGN
AGEYIFHDGSDDNGIGGEAFIHLLAQHGASLWVLNHYKWIVWKLACYERYYPARCAGKFL
TVSNVLEELKYRYEREVNHGHRSIIKKVLEEGDILPSSMMILCISSIHSNHVMESGTLFQ
AQTGNKSREAVKVELTDGWYSINAILDAPLSKQLDAGRLFVGQKLRIWGAELCGWNGPVS
PFEVFLVSSTISLFLHINGTYRVHWSARLGFCKVAGPPLAFKCIKNNGGLIPQTLAGITR
IYPILYKERLSSERSVVLSERMENKMMELHNQRRSAVVDNIVSEYQKERTSSHVYDHDDS
EGAKIYMMLETAAEPEFLMADMTPEQLRSFAAYKAKLNATRQSQMESSIEKALKDSGLGN
RDVTPFMRLRVVGLTYKNCQDKSKEGIVTIWNPTQKQCQELAEGEAYAIAGLTPYGSDSD
VLRFQTRGSTTKWLPLSSNARNSLVHFSIVGNQSHCQNIKKISVAFVVHVGKAYTSGQQK
KQWVFVTDGSIMKGLQSEKFTDTLLAIFFCSPLIDHDSFPPINHNLAGSTVGFCNLIKKE
KDHTYQIWVADANENSTYYLKFDSSHCRSHLRNPASSVTRWASNSSLIIQKLKEWLLGII
GDCKT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggttcttacggtttgtctaaattatcatctggtgcttctggatgcaaaagaaag
gtttccacccgatatccatctcggcatgcaaggatacacatcaaggaattttttgcagtt
cctccattaaagaaaaaagtgcattttccgaacccggtcagacaggtgacatctggtaat
gcaggagagtacatattccatgatggctctgatgataatggtattggaggagaagctttc
atccatctattggcacaacatggggcttccctgtgggtattgaatcattacaagtggatt
gtatggaaactggcatgctatgagagatactatccagctaggtgtgcgggaaaatttcta
actgtatcaaatgtgcttgaggaactgaagtacagatatgaaagagaagtgaatcatggc
caccgatctatcatcaagaaagttcttgaagaaggggatatactgccttcttcaatgatg
atcctttgcatatctagcattcactcaaatcatgtgatggaaagtgggacattatttcag
gcacaaaccgggaataagagcagggaggcagtaaaagttgaactaactgatggatggtat
tctataaatgccattttagatgctccattgtcaaagcaactggatgctggaagattattt
gtaggacagaagcttcggatctggggagcggaattatgtggctggaacgggccagtttca
ccctttgaggtttttctggtgtcatcaacaattagcttatttcttcacataaatggaaca
tatagagttcattggtcagcgcggttaggattttgtaaagttgccggtccgcctttggct
ttcaaatgcataaaaaacaatggaggtttaatacctcagaccttggcaggaattacccgt
atatatcccattctttacaaagaaaggttaagcagtgaacgatctgttgtcttatcagag
aggatggagaataaaatgatggagctgcacaatcaaagacgctcagctgttgtggataac
attgtttcggagtatcagaaggaaagaacgagttcacatgtttatgatcacgacgatagt
gaaggggctaagatttatatgatgttggagacagctgcagaacctgaattcttgatggcg
gatatgactcccgagcagcttcgttcttttgctgcatataaggccaaattaaatgcaact
agacaatcacaaatggaaagttcgattgagaaagctctgaaagattctggcttgggaaac
cgagatgtaacgccatttatgaggttgcgggtcgttggattaacttacaaaaattgtcaa
gataagtctaaggaaggcatagtaacaatctggaacccaacacagaagcagtgtcaggag
ttggcagagggagaagcatatgcaattgcaggactcacgccatatggatctgattcggac
gtccttcgtttccagactagaggatctactaccaagtggttgccattatcttctaacgca
aggaacagtttagttcatttttcaatagtcggaaatcaatcccattgtcaaaacataaag
aaaatatctgttgcatttgttgtgcatgtcggaaaggcttatacatcaggtcagcaaaag
aagcaatgggtttttgtgactgatggatcgatcatgaaaggtttacaatcagagaagttt
acggacacattgcttgctattttcttttgctccccattgattgatcatgattcatttcca
ccaatcaaccataaccttgctggatctacggttggtttctgtaatcttataaaaaaggag
aaggaccatacttaccaaatatgggttgctgatgctaatgaaaactcaacctattacttg
aaatttgattcttcacactgtcgttctcatctcagaaatcctgccagttccgtcacaaga
tgggctagtaattctagcttgataatacagaaactcaaggaatggttgttgggtataatt
ggtgattgtaaaacctag
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