Medicago truncatula (barrel medic): 25495905
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Entry
25495905 CDS
T01716
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00600
Sphingolipid metabolism
mtr01100
Metabolic pathways
mtr04382
Cornified envelope formation
Module
mtr_M00094
Ceramide biosynthesis
mtr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
25495905
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
25495905
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mtr01007
]
25495905
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
25495905
Amino acid related enzymes [BR:
mtr01007
]
Aminotransferase (transaminase)
Class II
25495905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
25495905
NCBI-ProteinID:
XP_013451618
UniProt:
A0A072U8D8
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Position
6:complement(11115164..11125008)
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AA seq
490 aa
AA seq
DB search
MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPISSAPDAWFDVVERYSNDNNKTLKRTSKVSRCLNLGSYNYLGFAAADEYC
TPRVIDTLKKYSPSTCSTRVDGGTTALHNELEECVASFVKKPAALVFGMGYVTNSAILPV
LMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNVPSHLEEVLREQIAEGQPRTHRPWK
KIMVIVEGIYSMEGELCKLPEVIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTA
DIDIMMGTFTKSFGSCGGYIAGSKELIEYLKYTCPAHLYATSISPPAAQQIISSIKVILG
EDGSSRGAQKLAKIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
QNVAVVTVAFPATPLLLARARICISASHSREDLTKALQVISSVGDLIGIKYFPAEPTKQQ
QQDGKTVKFE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaataccgtatctcactgcactcacaacctatttcagttacggtttgctattc
gctttcggtcaattccgtgatttcttccgaaaaatcttcgactggtgcagttccaataat
cttcagggttatgcaccgatctgtttaggtcttgaagatttttatattcgtcgattatat
cttcggattcaggactgttttgggagaccaatatcaagtgctcctgatgcttggtttgat
gtagtcgaacgctactccaatgacaataacaagacactaaaacgaaccagtaaagtaagt
cgatgtcttaacttgggatcatataactatcttggttttgctgcggctgatgaatactgt
actcctcgagtgattgatacattgaagaagtattctccaagcacttgcagtacccgggtg
gatggaggcacgaccgcacttcacaatgaattggaggagtgtgttgctagttttgttaaa
aagccagctgctttggtttttggaatgggctatgtgacaaactctgctattcttccggtc
ttgatggggaagggaagtttgattattagtgattcactgaaccacaactcaattgttaat
ggtgcgcggggatcaggagcaactattcgtgtttttcaacacaacgtgccatcacatcta
gaagaagtgttacgagaacaaattgctgagggacagccaagaacacataggccctggaag
aagataatggttattgtggaggggatatacagcatggaaggagagctttgtaaacttccc
gaggtcatagctatatgcaaaaaatataaggcatatacatatttggatgaagcacacagc
attggagctgtgggcaagacaggaaggggtgtttgtgagctcttgggtgtggatactgct
gatattgatattatgatggggacattcaccaaatcatttggatcatgtggaggttatatt
gcaggatctaaggagcttattgaatatttgaagtacacttgccctgcacatctttatgca
acttcaatttcacccccagctgcacaacaaataatatcttccattaaagttattcttggc
gaagatggttcaagtcgaggtgcccagaaacttgcaaaaattcgagaaaatagtaacttt
ttcaggtcagaactgcagaagatgggatttgaggttcttggagataatgattctcctgta
atgccaatcatgctttataacccagccaaaatccctgccttctcaagggagtgcctcagg
cagaatgttgctgttgtgactgttgcatttccagcaaccccattgctactggccagagca
cgtatatgcatatcagcttctcattcaagggaagaccttaccaaggccttgcaggttatt
agcagtgtaggtgatctaattggcataaaatacttccctgctgaaccaacgaagcaacaa
caacaagatggtaaaactgtgaagttcgagtga
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