Medicago truncatula (barrel medic): 25496355
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Entry
25496355 CDS
T01716
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
25496355
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
25496355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UNC45-central
Motif
Other DBs
NCBI-GeneID:
25496355
NCBI-ProteinID:
XP_024641518
LinkDB
All DBs
Position
6:complement(21566818..21578315)
Genome browser
AA seq
1681 aa
AA seq
DB search
MRTRFLNNDYFTLPPLHPPFLHLPVPRLPTPPSTTANHHHHHHLFTPLSNLSLHLDPFPI
ESALSSFLSAVLPHQISVEENDLTVLNPDRDSSVAEFRNCEELEADFIFEDHVSNADIEV
SKESETVTRGDENKVVYEPIQFETPEQLDTLLENVCFTEKERMEMLSKTPEVENCMEMLM
PESLRQYPYEDLESVSRIEDVISEYLKGENACASEGNIPVQHLAHSEKKMFLILEVDEES
LGIPTSLSMVDIVESYFGNIKPQSFDERYQSITEGNELLDSEMHEMVKLFSEDCVSKKSL
VLSDIFPERDFINMLESEHVDRNVALDGTLQSNNALLVNLITFQEFVFFDEDMINTFEAF
YDTKASNDLEETSYWMFKKEFNFKSFDELIVSNEMALGDDKFKSLPVPVISDHKKMIYVH
DIIEELFSNMKVQTLSASDGIYLNWDLLEEDKCSYNISNWYHTIWAKIDMNNHDFGEESL
DNRKSILELVFFGDTSGACDLQNSEELQKLLSECISQLDNRLVEFAANTLLEHGSSNKGC
REQLPEKKAQRASSLFKSTSEIRNLSHTTGKCDLQQSEELQKLLSDSISQPDNQRVEFAA
GKAVENGSSNEGRRKQLQEIKAERASLLFKSMSEISNFDYFLNPQKATSKESCCFGADSA
NANVSIPKVTSTALKAGLQSQGWHTVLHKVKLSDNIVALARYFEKSYVAILQSDTELAKT
HKLDVHYFELLSLQKHKLIEFHVNGNNMAFIVLSAIKQAVWYLCFYGLNPACLYVDKLCQ
NIDYLKSRLGVLQSLIKDENRKMESNISMAHSSLITVREILQANIKHDSLKALIVAEEVF
WGSLKSLLLFLGLSFSELNTSYRCQPYANNLPGDTNTKMKGLLSSDCLLVSYRNVSPLFP
FNKFGIILEYGGPNDSSRISELPSNSVGLPTLHFLTVELDDHAALKAFCQGVELPPYSEM
LLETEAPLLFNHKESMVNRKLERLLNFYPVEQRYDINSSKTALEADNFVPLIPAVKTDHS
HQSLESFSGSVIIVNTQNVDKEMIVSRRSSYQVILAMEKGGIQVVERDLDLPVDIILSSA
VCLAWYDSRNLGKKATPATEASSSLSLCVENIATDILPLLSFYFRGCFLVFEGEFNFLST
VMEFSDGFYAAATSLGIDLQIFFSYSPELTNEVMINCIKSTAILTRGLYPKMPDSVTLAE
SFLTQFPGINPLTAHSILSLGVTLHEFLAWSHEQRIRVLEKYHVPEESLSLLSVFCRYGE
REDSKSIMTDCSSSVSSGPDSDRCRFYQADNKRKRTNPVINGQNDELLQFKTLNHDEAIP
DPSTLQNPFNLGMSRDAGRSRDLGKSSLYTNDAFYQKQRNIATTTRNHSRVSPSSWNCKA
SQISEHLGHPSFSLKNKELSQNEIMDTGLNWHNLGNFEKLHEDIRGEVVDLTNSPLLDES
FSISDSMYFPNLMTETEKDHMRKNKIVRKLSFDNSIQPETNSIWGSMNDTGEIDHHEEPD
FGKDAFPLDFNPHGSIDSTPVRNLGGITFQEGMSYLSETPLSRVRRSGTPLKHSPWTTEF
INKVKEKSKLRQKSVLSGNISSYFGYQGNISKASKKRSPSILESFRYQPSKTPGNIPEQK
RQKQSAKSSNSAKKGRYAVPISARTPNDKRSTQTLTFGRSATGGQTKLVWSDKRKFPYQA
M
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacacgctttctaaacaacgactacttcacacttccaccattgcatccccctttc
ctccaccttcccgtccctcgtctccctacaccgccgtccaccaccgcgaaccaccaccac
caccaccacctcttcactcctctctccaatctctccctccacctcgatcctttcccgatc
gaatccgctctctcctccttcctttccgcggttctccctcaccaaatcagcgtcgaagag
aacgatctaacggttttgaatccagatcgtgattcctccgttgccgaatttcgaaattgc
gaggagctagaagcagattttatctttgaagatcatgtctccaatgctgatattgaagtt
tccaaagagagtgaaacggttactcgtggtgatgaaaacaaagttgtttatgaaccaatt
caattcgaaacacctgagcagttggacacactcttggaaaacgtatgcttcactgagaag
gagaggatggaaatgctgtctaaaactccagaggttgaaaattgcatggaaatgctcatg
cctgagtcattgaggcagtacccttacgaggatctagaatcagtatcaaggattgaggat
gttatttctgagtacctgaagggggagaatgcatgtgcttcagaaggtaatatacctgtt
cagcacctggcacactctgagaaaaagatgtttctcattttggaagtggatgaggaaagt
ttgggaattcccacaagcttatctatggtagatatcgttgaatcatatttcgggaatatc
aaacctcaaagttttgatgaacgatatcagtcgataacagagggcaacgaacttttggat
tctgagatgcatgaaatggtgaagttgttttctgaagactgtgtatcaaagaagagtttg
gtgttatcagatatatttcctgaaagagattttataaatatgttggaaagtgaacatgtg
gataggaatgttgccctggatgggacattgcagtctaataatgctttgttagttaactta
attaccttccaggagttcgtgttctttgatgaggacatgattaatacctttgaagctttt
tatgacacaaaagcatcaaatgatcttgaagaaacaagttactggatgttcaagaaagag
tttaactttaagagttttgatgaattgattgttagtaatgagatggcattaggagatgac
aaattcaaatctttgcctgtacctgtaatctctgaccacaaaaaaatgatatatgtacat
gatatcattgaagaactattttccaacatgaaggtccaaaccctatctgcatctgatgga
atttacttaaactgggatctactggaagaagataaatgcagttacaatatatctaactgg
tatcataccatatgggccaagatagatatgaacaaccatgatttcggagaagaatctctt
gacaacaggaaatcgatacttgagttggttttctttggtgatacttcaggggcttgtgac
cttcaaaatagtgaagagttgcagaagttgctttctgaatgcatttctcagcttgacaat
cggcttgtagaatttgctgcgaacacactcttagaacatgggtcttccaataaaggatgc
cgtgaacaattacctgaaaaaaaggcacagagggcttcatcattatttaagtctacgtct
gaaatcagaaaccttagtcatactacaggtaaatgtgaccttcagcaaagtgaagagttg
cagaagttgctttctgatagcatttctcagcctgacaaccagcgtgtagagtttgctgca
ggcaaagcagtagaaaatggatcttccaatgaaggacgtcgaaaacagttacaggaaata
aaagcagagagggcttcattattatttaagtctatgtcagaaatcagcaactttgattat
ttcttaaaccctcaaaaagcaacttccaaggagagttgttgttttggagcagactccgcc
aatgctaatgttagtattccaaaagttacatccactgcattgaaagctggtctacaatca
caagggtggcacactgttctgcataaagttaagctgtctgacaatattgtggcacttgct
aggtattttgaaaaaagctatgtggccattttgcagagtgatacagagctggcaaagaca
cataaattggatgtacattattttgaattgctgagtcttcaaaaacacaagctgattgaa
ttccatgtaaatggaaataatatggcgtttattgtgttaagtgcaattaaacaggcagtt
tggtacttgtgtttctatggtctcaacccagcatgcttgtatgtagacaaactatgtcaa
aacatagactacttgaaatcaagattaggcgtcctccaatctttgatcaaagatgaaaat
aggaagatggaaagcaatatttctatggcacactcgtcgctgataactgtcagggaaatt
ttacaggcaaacatcaaacatgatagtttgaaagctttaattgtggctgaagaagtattc
tgggggtctttgaaaagtctccttctcttcctggggttatcattcagtgaactaaatact
tcttacagatgtcagccatatgcaaataatcttcctggtgacactaatactaaaatgaag
ggacttctgagttcagactgcttgctggtttcatacaggaatgtttctccattgtttcca
ttcaacaaatttggcattatcttggaatatggtggtccaaatgactcatctagaatatct
gaacttccatcaaactcggttggattgcctactcttcattttttgacggttgaattggat
gaccatgctgctcttaaagcattctgtcaaggtgttgaattgcccccatactctgaaatg
ttgctggaaactgaggctcctcttcttttcaatcacaaggaaagtatggtgaatcgaaaa
ttagagcgactactgaatttttatcctgtagaacagagatatgatataaattcttcaaag
actgcacttgaagcagacaattttgtgcctctaattcctgctgtgaaaactgatcatagc
catcaaagcttggaatctttttctggatcggtcatcattgtgaatactcaaaatgtagat
aaggaaatgatagtgtctagaagaagttcttaccaagtaattcttgcgatggagaaagga
ggaattcaagttgttgaacgtgatttagatttaccagtggatattatattaagttcagca
gtttgcttggcatggtatgatagcagaaacctagggaagaaagcaactccagcaactgag
gcatcttcaagtttgtcattatgtgttgagaatattgcaactgacattcttccgttgctt
agtttttacttccgtggctgctttctggtctttgaaggagaatttaactttctttcaact
gttatggagttttcggatggattttatgcagcagcaacaagtctgggaattgatttgcag
attttcttctcgtactcacctgagttgaccaatgaagttatgataaactgcattaagagt
actgccattctgacaaggggtttgtatcctaaaatgcctgattcagtaactcttgctgag
tcatttcttacgcaatttcctggaataaatcctttgacagcacattctatactatcttta
ggggtcacacttcatgagtttcttgcttggtcacacgaacaaaggatacgtgttttggaa
aaatatcatgttccagaagaaagtctttccctattgagtgttttctgcagatatggtgaa
cgggaggattcaaaatctataatgacagactgctcctcttcggtatcttctggtccagat
tcagataggtgtcgcttttatcaagctgacaataaaagaaaaagaacaaaccctgtaatc
aatggtcagaatgatgaactgttgcaattcaaaacactaaaccatgatgaggctatccca
gatccatctactttgcaaaatccttttaatcttggtatgtcaagagatgctgggaggtcc
agagacttgggaaaatctagtttgtacacgaatgatgcgttttaccagaagcaaagaaac
attgcgacaacaacgagaaaccattccagagtatctccatcatcatggaactgtaaagct
tcccaaatatcagagcatctaggacatcccagtttttctttgaaaaataaagagttgtct
caaaatgaaataatggatactggtttgaattggcacaaccttggtaattttgagaagctg
catgaggacattagaggtgaggtggttgacttgactaatagtccactattagatgaaagc
ttctccatttccgactccatgtatttcccaaatttgatgaccgagacagagaaagatcac
atgaggaagaataaaattgtaagaaaattgtcatttgataacagtattcaaccagaaacc
aactcaatatggggatcaatgaatgatacaggagaaattgatcaccatgaagaaccagat
tttggaaaagatgcatttcctcttgatttcaatccccatgggagtattgattcaactccg
gtaagaaacttaggaggaataaccttccaggagggaatgtcgtatttgagcgaaactcca
ctctcgcgtgtccgcaggtctggtactccgttaaagcattccccctggacaactgaattt
attaataaagtaaaagagaagagcaaattgcgtcaaaagtcagtattatctgggaatatc
agttcttattttgggtaccaggggaatatttcgaaagcttctaagaagagaagtccctct
atacttgagtcctttaggtaccaacctagtaaaacaccgggaaatattccagaacagaaa
agacagaagcaatctgcaaaatcttcaaactcagccaagaaaggaagatatgccgttccc
atatctgcacggactcctaatgacaagagatcgacacagacactgacatttgggaggagc
gcaactggaggtcaaactaagctggtctggagtgataaaagaaaatttccatatcaggca
atgtaa
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