Medicago truncatula (barrel medic): 25496562
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Entry
25496562 CDS
T01716
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25496562
03036 Chromosome and associated proteins [BR:
mtr03036
]
25496562
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
25496562
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Helicases
25496562
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
25496562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
FRG2
CMS1
Motif
Other DBs
NCBI-GeneID:
25496562
NCBI-ProteinID:
XP_013452399
UniProt:
A0A072U9X5
LinkDB
All DBs
Position
6:complement(29446301..29452229)
Genome browser
AA seq
681 aa
AA seq
DB search
MPSLPITNDTVSMESPKSKSSKKKKLLQNDVVSEVEAVSAKKKESSKKRKKSSDDDEETK
SDISSEEGSRKVKKEKKKKKSKVEDEEIVEEEEVAVKKDDPNAVSNFRISEPLRMKLKEN
KIEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKSVRKTGYGRV
PSVIVLLPTRELANQVYADFELYGSSLGLSACAVYGGAPYGAQETKLRRGVDIVIGTPGR
IKDHIERGNIDLSHLKFRVLDEADEMLRMGFVDDVELILGKVQDVTKVQTLLFSATLPSW
VKQISTKFLKSDKKTADLVGNEKMKASTNVRHIILPCSSTARAQLIPDIIRCYSSGGRTI
IFAEKKESASELAGLLPGARALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDIND
VQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRRSNIAKIEREAGIKFEHVSAP
QPDEIAKAMGGDAAEMITDVSDSVIPAFKSAAEQLLNNSGLSAVELLAKALAKAVGYTEV
KNRSLLTSMEGYVTLILEGGKPMFTPSFAFGTLRRFVPEDKVDAVQGLALTADGLGAVFD
VPAKDLDIFLSSQKNAVNVSLKVAKELPSLQQREESSGRRFGGGRGFSGGRGGGGYRFGG
RGGGGGGGRGYGGGRGGGNRW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccttcattacctatcacaaacgacaccgtttcaatggaaagccctaaatcaaaatca
tcaaaaaagaaaaagcttctccaaaacgacgtcgtttcagaggtcgaagccgtttcggcg
aagaaaaaggagagttcgaagaaaaggaagaaaagttcagatgatgatgaagaaacgaag
agtgatataagctctgaagaaggttctagaaaagtgaagaaggagaaaaagaagaagaaa
tcgaaggttgaagatgaagaaattgttgaagaagaagaggttgctgtgaagaaagatgat
ccgaatgcagtttcgaattttaggatttcggaaccattgaggatgaaattgaaggaaaat
aagattgaagctttgtttccgattcaagctatgacttttaataccattcttgatgggtct
gatttggttggtcgtgctcgtactggacagggtaaaactcttgcatttgtgttgcccata
ttagagtcattgacaaatggtccagctaaatcagttagaaagactggctatgggagagtc
ccaagtgttatcgtgcttctacctacaagggaattggccaatcaggtgtatgctgacttt
gaactttatggttcatccttgggattgtctgcttgcgctgtatatggtggagccccatat
ggcgctcaggagaccaaacttagaaggggtgttgatattgttattggaacaccagggcgt
attaaggatcatatcgagagggggaatattgacctgagccacctgaagttccgtgtcctt
gacgaggcagatgagatgttgaggatgggttttgttgatgatgttgaactcattctaggc
aaggtacaagatgttaccaaagttcagacacttcttttcagtgctactttgccaagctgg
gttaagcaaatttctacgaaatttctgaaatcagataagaaaactgcagatcttgttgga
aatgagaaaatgaaagccagcaccaatgttaggcatattatccttccatgtagtagtact
gccagggcacagcttatccctgatattattcgctgttatagcagtggaggccggacaatt
atatttgcggagaaaaaggagtctgcttctgagcttgctggattgttgcctggagcaaga
gctctccatggtgacatacagcagtcacaacgtgagattacgttgaaaggctttagatct
gggaaattcatgacattggtggccaccaatgttgcggccagaggtcttgacatcaatgat
gttcagttgattatccagtgtgagcctccgcgggatgtagaagcatatatacatcgatct
gggcggacaggaagagctggcaacactggagttgctgtgatgctttatgatcccagaagg
tcgaatatagctaaaatagaaagagaagcaggtattaaatttgaacatgtatctgctcct
cagcctgatgaaattgccaaagcaatgggtggggatgctgctgaaatgattaccgatgtg
tctgacagtgtgattcctgcattcaaatctgctgctgagcaacttctgaacaactctggt
ttatcagctgttgagttactcgcaaaagctcttgcaaaggcggttggttatactgaggta
aagaacagatccctactgacttcgatggagggttatgttacattaattcttgagggagga
aagcctatgttcaccccatcctttgcatttggaaccttgaggagattcgtacctgaggat
aaggtcgatgcagtgcaaggtcttgctcttactgcagatggactgggtgctgtttttgat
gtacctgccaaggacttggatatatttctctcaagtcaaaagaatgccgttaatgtaagc
ctgaaggttgctaaagaattgcctagtttgcaacaaagagaggaatcaagtgggcgcaga
tttggcggtggtcgtggattttcaggtggaagaggcggaggaggttataggtttggcgga
agaggtggtggtggtggtggtggaagaggttacggtggaggcagaggagggggaaacaga
tggtaa
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