Medicago truncatula (barrel medic): 25496698
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Entry
25496698 CDS
T01716
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
25496698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
25496698
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
25496698
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
25496698
NCBI-ProteinID:
XP_013452795
UniProt:
A0A072UCP0
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Position
6:35508078..35520337
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AA seq
682 aa
AA seq
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MNDFEKDEITILSEKRPQPSEQHQDSNFQRNISRTQSASVFIPMASLDPYERQPNLVRHT
ARNSPISQMSGPLYATPATGNIVVAGNKFHNFLYGDANCFGRKLLSFCSSCIPRVMNPHC
KVVQQWNTIFAISCSVAIFFDPLFFFLYYVNKDDKCIVINWTMATLLSLLRSIMDVLYFL
NILLQFRLAYINPEYKGIGAADLVDHPTRIAHNYLKGYFFIDLFVASPLPQIMILLSLGS
LVAHNTKNLLPLVISLQYIPKLYRYCSLLIGQSPTPFIFASGGAYLTIGLLTFMFFGHVV
GSCWYLFGLQRVNQCLRDACHHSNLLGCMDLIDCDSKVGNISATLWSEDKSADACLNATS
GAFSYGIYGNAIPLTIETKVINKYVYALFWGFQQIITLAGNQTPSYFVWEVLFTVSIMAL
GLILLALLIGNIQGFFQTLGKRSLEWLSRGSDVEQWMSRRHLPENLKRRVRQAERYSWAA
TRGVSEKMILENLPEDLQIDIRRHIFKFVKKVPIFSLMDENEPILDAILERLIHTMYNRG
SRILSQGCLIQKVVFIVRGKLESIGEDGIPVTLTEGDACGEELLRWYLERSSKSKEGKKV
KLQGWGLTSTRSVKCLTNVEAFSLRVKDIEELATLFAGFLRSPHTQGVIRNESPYGKSYR
ANKIQIAWINRKKHLRRANATQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattttgaaaaagatgaaattacgattctttcagaaaaacgtccacaaccatcc
gagcagcatcaggactccaacttccaaaggaacatatcgaggacacaaagcgcttcagtt
tttattcctatggcttcccttgatccatatgagagacaaccgaatcttgtcagacacacc
gcgaggaattctccgattagccaaatgagtggtccactatatgctactcctgcaactgga
aatatagtagtggcgggaaacaagtttcacaattttctctatggcgacgccaattgtttc
ggaagaaaacttttatctttttgctcttcatgtattcctagagttatgaaccctcactgt
aaagtcgtacaacaatggaacacaatttttgctatatcttgctcagtcgcaatttttttt
gatccgttatttttcttcttatactatgtgaacaaggatgataaatgtattgttatcaat
tggacaatggcaacattactttctttacttcgaagcataatggatgtcctgtattttttg
aacattcttctccaattcaggttggcttacattaatcctgagtataagggcattggtgct
gcagatttagttgaccatcccacgagaattgctcataactacttgaagggttactttttt
atcgacttatttgttgcatcacctcttcctcagataatgatattgctttccttggggtct
ttagtagcacataatactaagaatcttctacctctagtgatctctttacagtacattcca
aaattatatagatattgttcgctcttaataggccaatctccaactccattcatatttgcg
tcaggcggggcatatttaactataggtcttctcacctttatgttctttggccatgttgtt
ggttcatgctggtacctttttggtctacagagggttaaccaatgtttgcgagatgcctgc
catcattctaatctacttggatgcatggacttgattgattgtgattctaaagtggggaat
atatcagccacattatggagtgaagacaagagtgctgatgcttgtttgaatgccacatct
ggtgctttttcttatggaatttatggcaatgccataccacttactatagaaactaaggtg
atcaacaaatatgtgtatgcactcttttggggattccagcaaatcattactctggctggt
aatcaaactccaagctattttgtgtgggaagtcctctttacagtttccatcatggcattg
ggactcatacttctagcccttctcatcggaaacatacagggattttttcagactcttggc
aagagaagcctggaatggttaagtagaggctctgatgttgagcaatggatgagccgtcgt
cacttaccggaaaatctcaaaaggagagtacggcaggctgaacggtatagttgggctgca
acaaggggtgtttctgagaaaatgattttggagaatttgccagaagatctccaaatagac
atacgacgtcatatcttcaaattcgttaaaaaagttccaattttttccctaatggatgag
aatgagcctatcttagatgccatccttgagcgactaatacatacgatgtacaacagagga
agtaggattttgagtcagggttgtctcatacagaaggtggtgtttatcgtgcgtggaaaa
ttggagagcatcggagaagatggaattccggttacgttaactgaaggggatgcttgtggt
gaagagcttctacgatggtatcttgaacgatcttctaaaagcaaagaaggtaaaaaagta
aagcttcaaggatggggcttaactagtaccagatcagtaaaatgcttaaccaatgtggag
gcattttcactccgcgttaaagacattgaagaactcgcaactctttttgcaggattcttg
cggagccctcacactcaaggagtcataaggaatgaatcgccttatgggaaatcatataga
gcaaacaaaattcagattgcatggataaacaggaagaagcatctaagacgagctaatgcc
acacaatga
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