Medicago truncatula (barrel medic): 25496775
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Entry
25496775 CDS
T01716
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
mtr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25496775
09124 Replication and repair
03420 Nucleotide excision repair
25496775
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mtr01001
]
25496775
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25496775
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25496775
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25496775
Enzymes [BR:
mtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
25496775
2.7.11.23 [RNA-polymerase]-subunit kinase
25496775
Protein kinases [BR:
mtr01001
]
Serine/threonine kinases: CMGC group
CDK family
25496775
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
25496775
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
25496775
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
25496775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
25496775
NCBI-ProteinID:
XP_013452931
UniProt:
A0A072UB06
LinkDB
All DBs
Position
6:37702118..37708381
Genome browser
AA seq
412 aa
AA seq
DB search
MAELDPAKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRIGKQKEGVNFTALR
EIKLLKELKDPNIIELIDCFPHKGNLHLVFEFMETDLEAVIRDRNIFLAPGDIKSYLQMT
LKGLAHCHKKWILHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPTQWPDMV
YLPDYVEYQFVPAPPLRSLFPMATDDALDLLSKMFTYDPKDRISVQQALEHRYFTCPPQP
TDPVKLPRPAPKKEIKPSDLNPPEGPTVLSPPRKTRRVMPGRDGLEGNSLQGDRGDDNHG
NLKQTAGDNTGKNEPAPMSLDFSVFGLKPPNRPTINSADRSHLKRKLDLEFQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattagatccggctaagaaagtagctgataggtatctcaaacgtgaggttctt
ggtgaaggtacctatggtgttgtttacaaagccattgatacccagacgggacagacggtt
gctattaagaagattcgaatcggaaaacagaaagaaggggtgaattttactgctcttaga
gaaattaaactgcttaaagagctcaaagatcccaatataattgagttgattgattgcttc
ccacataaagggaatttgcatcttgtgtttgaattcatggagacagatcttgaagctgtc
ataagagaccgaaatattttccttgcaccgggtgatataaaatcttaccttcaaatgaca
ctaaaaggtcttgctcattgtcacaaaaaatggatattgcatagggatatgaaaccaaat
aatttgttgatcggacctaatggacaactgaaacttgcagattttggtttagcgcgtatt
tttggaagcccagatcgcaggttcactcatcaggtatttgcgcggtggtatagagcacct
gagctgttatttggtaccaagcagtatggcccaggagtagatgtttgggctgcagcctgc
atatttgccgagcttcttcttcgtcgaccttttttgcagggatcaagtgatatcgaccaa
ttaggaaagatttttgctgcatttggaactccatctcctactcagtggcctgatatggta
taccttccagattatgttgaatatcaatttgtgccggcccctcctctgcggtctttattt
ccaatggcaactgatgatgctttagacttgttgtctaaaatgttcacatatgacccaaaa
gatagaatttcagtgcaacaagcattagaacacagatacttcacttgtcctcctcaacca
acagacccagttaaacttccaagacctgcccctaagaaggaaattaagccatcagatttg
aatcctccagagggtcccactgtcttgtcacctccaagaaagactaggagagtaatgcca
ggacgtgatggacttgaaggtaattctttgcaaggagataggggggacgataatcatggt
aacctcaaacagacagctggtgataatacagggaagaatgagcctgcaccaatgtcacta
gatttttctgtctttggattaaaacctccaaacagaccaacaattaacagcgctgacaga
tcacatttaaaaaggaaattagatctagaattccagtaa
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